RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 PDK4Q16654 411 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 KYAT1Q16773 422 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 SMTNL2Q2TAL5 461 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 KLHL38Q2WGJ6 581 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 WDR78Q5VTH9 848 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 CGB2Q6NT52 195 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 KIAA0319LQ8IZA0 1049 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 TTC39CQ8N584 583 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 KCTD6Q8NC69 237 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 PYROXD1Q8WU10 500 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 CNKSR2Q8WXI2 1034 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 CPT1BQ92523 772 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 TMEM176AQ96HP8 235 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 TACO1Q9BSH4 297 aaKnown RBP11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 MIS12Q9H081 205 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 RSAD1Q9HA92 442 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 ASNSD1Q9NWL6 643 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 ZMYND8Q9ULU4 1186 aaPredicted RBP11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 AGAP1Q9UPQ3 857 aa11.33□□□□□ -0.6
PTPMT1-204ENST00000527079 ZSWIM8A7E2V4 1837 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 LACTBL1A8MY62 500 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ATP6V1G2O95670 118 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ERBB2P04626 1255 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 PGK2P07205 417 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 NFICP08651 508 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 STAG3L1P0CL83 205 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 VDRP11473 427 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 NQO1P15559 274 aaKnown RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 IREB2P48200 963 aaKnown RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 GPX6P59796 221 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 DYNLT1P63172 113 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ADCY1Q08828 1119 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 KCNT1Q5JUK3 1230 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ZNF484Q5JVG2 852 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 TBC1D1Q86TI0 1168 aaPredicted RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 RFX6Q8HWS3 928 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 FITM2Q8N6M3 262 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 PAIP2Q9BPZ3 127 aaKnown RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 SDCBP2Q9H190 292 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ERAP1Q9NZ08 941 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 TJP2Q9UDY2 1190 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 RABGEF1Q9UJ41 708 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 MCM3APO60318 1980 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 GPR25O00155 361 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 MCF2LO15068 1137 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 TYROBPO43914 113 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 SPAG7O75391 227 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 MICAL2O94851 1124 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 TRUB2O95900 331 aaKnown RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ITGB3P05106 788 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 GJB1P08034 283 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 MIPP30301 263 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 STIP1P31948 543 aaKnown RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 RPL22P35268 128 aaKnown RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 GPD2P43304 727 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 CLCN3P51790 818 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 GDF10P55107 478 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 CDH8P55286 799 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 TTLL4Q14679 1199 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 PREPLQ4J6C6 727 aaPredicted RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 HP1BP3Q5SSJ5 553 aaPredicted RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 WLSQ5T9L3 541 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 JADE1Q6IE81 842 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ADGRD1Q6QNK2 874 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 FAM228AQ86W67 206 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ERO1BQ86YB8 467 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 TMEM192Q8IY95 271 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 PDIK1LQ8N165 341 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 TRAPPC12Q8WVT3 735 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 MMP19Q99542 508 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ELOVL4Q9GZR5 314 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 ACSS3Q9H6R3 686 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 MINDY3Q9H8M7 445 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 SAE1Q9UBE0 346 aaPredicted RBP11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 KIAA1257Q9ULG3 409 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 USP18Q9UMW8 372 aa11.32□□□□□ -0.6
PTPMT1-204ENST00000527079 CLUHO75153 1309 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 ZWINTO95229 277 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 C22orf31O95567 290 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 ATP2A2P16615 1042 aaKnown RBP11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 CA4P22748 312 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 GBP2P32456 591 aaPredicted RBP11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 ZNF143P52747 638 aaPredicted RBP11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 EIF3EP60228 445 aaKnown RBP11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 CDR2LQ86X02 465 aaPredicted RBP11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 EMC1Q8N766 993 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 LRRC8CQ8TDW0 803 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 FBF1Q8TES7 1133 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 KLHL29Q96CT2 875 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 RMDN2Q96LZ7 410 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 TWNKQ96RR1 684 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 ADPGKQ9BRR6 497 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 DHRS4Q9BTZ2 278 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 SMYD3Q9H7B4 428 aa11.31□□□□□ -0.6
PTPMT1-204ENST00000527079 IFT122Q9HBG6 1241 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms