RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 PIK3CAP42336 1068 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 FAM160A1Q05DH4 1040 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 ADAM9Q13443 819 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 NFIL3Q16649 462 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 SGSM1Q2NKQ1 1148 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 B3GALNT2Q8NCR0 500 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 TTC16Q8NEE8 873 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 MYRFLQ96LU7 910 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 MMRN2Q9H8L6 949 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 VRTNQ9H8Y1 702 aa17.32■□□□□ 0.36
BEST1-205ENST00000526988 SHISA7A6NL88 538 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 ARNTLO00327 626 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 CLDN5O00501 218 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 TRIM66O15016 1216 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 MAPK13O15264 365 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 GFRA3O60609 400 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 TRIM49P0CI25 452 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 TRIM49CP0CI26 452 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 CCNE1P24864 410 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 NBL1P41271 181 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 MAGEA9P43362 315 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 SOX9P48436 509 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 GCLMP48507 274 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 C1orf220Q5T0J3 134 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 INTS8Q75QN2 995 aaKnown RBP17.31■□□□□ 0.36
BEST1-205ENST00000526988 ENGASEQ8NFI3 743 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 ERCC4Q92889 916 aaPredicted RBP17.31■□□□□ 0.36
BEST1-205ENST00000526988 USP13Q92995 863 aaPredicted RBP17.31■□□□□ 0.36
BEST1-205ENST00000526988 SMARCE1Q969G3 411 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 EEF2KMTQ96G04 330 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 SPATA17Q96L03 361 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 MED10Q9BTT4 135 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 B3GNT5Q9BYG0 378 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 ZNF518BQ9C0D4 1074 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 SDCBP2Q9H190 292 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 GKN1Q9NS71 199 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 TDP1Q9NUW8 608 aa17.31■□□□□ 0.36
BEST1-205ENST00000526988 HOOK1Q9UJC3 728 aaKnown RBP17.31■□□□□ 0.36
BEST1-205ENST00000526988 TRAV19A0A0A6YYK7 116 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 SOBPA7XYQ1 873 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 F8VP50 259 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 LAMTOR5O43504 91 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 TADA3O75528 432 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 HLA-DRAP01903 254 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 PLCB2Q00722 1185 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 SPOPLQ6IQ16 392 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 DENND5BQ6ZUT9 1274 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 TAF4BQ92750 862 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 CLDN23Q96B33 292 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 CYP2S1Q96SQ9 504 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 ELOVL4Q9GZR5 314 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 C8orf33Q9H7E9 229 aaPredicted RBP17.3■□□□□ 0.36
BEST1-205ENST00000526988 LMAN1LQ9HAT1 526 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 GTSE1Q9NYZ3 720 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 CCL26Q9Y258 94 aa17.3■□□□□ 0.36
BEST1-205ENST00000526988 PROB1E7EW31 1015 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 CETN3O15182 167 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 CKMP06732 381 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 USP17L7P0C7H9 530 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 SP9P0CG40 484 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 PRCPP42785 496 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 USP46P62068 366 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 TNK2Q07912 1038 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 PPP3CAQ08209 521 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 IFRD2Q12894 506 aaPredicted RBP17.29■□□□□ 0.36
BEST1-205ENST00000526988 EDRF1Q3B7T1 1238 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 ZCWPW2Q504Y3 356 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 ZNF658Q5TYW1 1059 aaPredicted RBP17.29■□□□□ 0.36
BEST1-205ENST00000526988 CC2D1AQ6P1N0 951 aaPredicted RBP17.29■□□□□ 0.36
BEST1-205ENST00000526988 ACOT1Q86TX2 421 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 ARL14EPQ8N8R7 260 aaPredicted RBP17.29■□□□□ 0.36
BEST1-205ENST00000526988 TNIP3Q96KP6 325 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 C8orf48Q96LL4 319 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 CEP295NLQ96MC4 621 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 GSDMAQ96QA5 445 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 TSG101Q99816 390 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 IMPG2Q9BZV3 1241 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 KIF9Q9HAQ2 790 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 EHD2Q9NZN4 543 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 PCDHA5Q9Y5H7 936 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 R4GN57 208 aa17.29■□□□□ 0.36
BEST1-205ENST00000526988 ATP8B3O60423 1300 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 CACNA1HO95180 2353 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 SPECC1L-ADORA2AF8WAN1 911 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 ABL1P00519 1130 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 ASS1P00966 412 aaKnown RBP17.28■□□□□ 0.36
BEST1-205ENST00000526988 EPB41P11171 864 aaKnown RBP17.28■□□□□ 0.36
BEST1-205ENST00000526988 RPS9P46781 194 aaKnown RBP17.28■□□□□ 0.36
BEST1-205ENST00000526988 CACNA2D1P54289 1103 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 MLLT6P55198 1093 aaPredicted RBP17.28■□□□□ 0.36
BEST1-205ENST00000526988 CSTF1Q05048 431 aaKnown RBP17.28■□□□□ 0.36
BEST1-205ENST00000526988 ORC1Q13415 861 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 FZD5Q13467 585 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 ITPRIPL2Q3MIP1 535 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 ISM2Q6H9L7 571 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 ASCL5Q7RTU5 278 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 TAS1R2Q8TE23 839 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 NKD2Q969F2 451 aaPredicted RBP17.28■□□□□ 0.36
BEST1-205ENST00000526988 MSANTD3Q96H12 275 aa17.28■□□□□ 0.36
BEST1-205ENST00000526988 TIGD1Q96MW7 591 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms