RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ARHGAP17Q68EM7 881 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 GPR153Q6NV75 609 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 DENND1BQ6P3S1 775 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 LILRA6Q6PI73 481 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 EP400NLQ6ZTU2 488 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 IRF2BP2Q7Z5L9 587 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 TTC30AQ86WT1 665 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 TC2NQ8N9U0 490 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 SLC7A14Q8TBB6 771 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 SPPL2BQ8TCT7 592 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 GPR152Q8TDT2 470 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 PPM1EQ8WY54 764 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 HNRNPABQ99729 332 aaKnown RBP14.54□□□□□ -0.08
CD44-224ENST00000526669 SMOQ99835 787 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 PDCL3Q9H2J4 239 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 ABHD10Q9NUJ1 306 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 SEPT11Q9NVA2 429 aaKnown RBP14.54□□□□□ -0.08
CD44-224ENST00000526669 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.54□□□□□ -0.08
CD44-224ENST00000526669 YIPF1Q9Y548 306 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 DENND4AQ7Z401 1863 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 TULP2O00295 520 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 MED7O43513 233 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 GLP2RO95838 553 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 C8AP07357 584 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 HAPLN1P10915 354 aaPredicted RBP14.53□□□□□ -0.08
CD44-224ENST00000526669 FOSL2P15408 326 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 CHRNB2P17787 502 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 GRIK1P39086 918 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 MAP3K7CLP57077 242 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 FMO1Q01740 532 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 KLHL30Q0D2K2 578 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 CNGA2Q16280 664 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 DDR2Q16832 855 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 LIN9Q5TKA1 542 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 CNGA4Q8IV77 575 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 OR8K1Q8NGG5 319 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 FEZF2Q8TBJ5 459 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 GIPC2Q8TF65 315 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 C2orf15Q8WU43 125 aaKnown RBP14.53□□□□□ -0.08
CD44-224ENST00000526669 DDX1Q92499 740 aaKnown RBP14.53□□□□□ -0.08
CD44-224ENST00000526669 SMARCD1Q96GM5 515 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 APOL5Q9BWW9 433 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 NUCKS1Q9H1E3 243 aaKnown RBP14.53□□□□□ -0.08
CD44-224ENST00000526669 HAUS4Q9H6D7 363 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 MTMR10Q9NXD2 777 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 AIPL1Q9NZN9 384 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 HESX1Q9UBX0 185 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 NOCTQ9UK39 431 aaKnown RBP14.53□□□□□ -0.08
CD44-224ENST00000526669 KIAA1257Q9ULG3 409 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 INSL5Q9Y5Q6 135 aa14.53□□□□□ -0.08
CD44-224ENST00000526669 GOLGA6L6A8MZA4 724 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 F8VP50 259 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 CCL16O15467 120 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 RFPL2O75678 378 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 POU3F3P20264 500 aaPredicted RBP14.52□□□□□ -0.09
CD44-224ENST00000526669 RGS7P49802 495 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 PDE4CQ08493 712 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 TWF1Q12792 350 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 SMARCB1Q12824 385 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 IFRD2Q12894 506 aaPredicted RBP14.52□□□□□ -0.09
CD44-224ENST00000526669 STILQ15468 1287 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.09
CD44-224ENST00000526669 CFAP221Q4G0U5 840 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 WDR59Q6PJI9 974 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 LCLAT1Q6UWP7 414 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 CLEC20AQ6ZU45 233 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 ZNF571Q7Z3V5 609 aaPredicted RBP14.52□□□□□ -0.09
CD44-224ENST00000526669 TCEAL8Q8IYN2 117 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 C12orf76Q8N812 135 aaPredicted RBP14.52□□□□□ -0.09
CD44-224ENST00000526669 ZMIZ2Q8NF64 920 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 ANP32BQ92688 251 aaKnown RBP14.52□□□□□ -0.09
CD44-224ENST00000526669 SECISBP2LQ93073 1101 aaKnown RBP14.52□□□□□ -0.09
CD44-224ENST00000526669 FUBP3Q96I24 572 aaKnown RBP eCLIP14.52□□□□□ -0.09
CD44-224ENST00000526669 KCNK16Q96T55 309 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 DNAJC7Q99615 494 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 CDCA3Q99618 268 aaPredicted RBP14.52□□□□□ -0.09
CD44-224ENST00000526669 AGPAT1Q99943 283 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 DUSP16Q9BY84 665 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 CLDND1Q9NY35 253 aa14.52□□□□□ -0.09
CD44-224ENST00000526669 PIK3R2O00459 728 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 LRG1P02750 347 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 SERPING1P05155 500 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 CCDC172P0C7W6 258 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 NPR3P17342 541 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 ATF6P18850 670 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 TNFAIP3P21580 790 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 ANXA13P27216 316 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 PRKCIP41743 596 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 MAGEA11P43364 429 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 BCAT1P54687 386 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 CDR2Q01850 454 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 BST2Q10589 180 aaKnown RBP14.51□□□□□ -0.09
CD44-224ENST00000526669 MTMR3Q13615 1198 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 PPM1LQ5SGD2 360 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 HGSNATQ68CP4 663 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 CCDC149Q6ZUS6 474 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 GPRIN1Q7Z2K8 1008 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 EFHBQ8N7U6 833 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 ANKRD52Q8NB46 1076 aa14.51□□□□□ -0.09
CD44-224ENST00000526669 C1orf131Q8NDD1 294 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms