RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 CNPY2Q9Y2B0 182 aa5.89□□□□□ -1.47
SVIP-202ENST00000525670 SLC30A1Q9Y6M5 507 aa5.89□□□□□ -1.47
SVIP-202ENST00000525670 PFASO15067 1338 aa5.89□□□□□ -1.47
SVIP-202ENST00000525670 KIAA1217Q5T5P2 1943 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 FAM221BA6H8Z2 402 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 ATP2A1O14983 1001 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 STRNO43815 780 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 PLA2G6O60733 806 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 HMGB1P09429 215 aaKnown RBP5.88□□□□□ -1.47
SVIP-202ENST00000525670 ADCY8P40145 1251 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 LIFRP42702 1097 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 NEK4P51957 841 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 CD83Q01151 205 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 FOXE3Q13461 319 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 TBR1Q16650 682 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 TKFCQ3LXA3 575 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 MAP3K21Q5TCX8 1036 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 ARHGEF16Q5VV41 709 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 KANK2Q63ZY3 851 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 Q6ZSN1 163 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 USP30Q70CQ3 517 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 LARP4Q71RC2 724 aaKnown RBP eCLIP5.88□□□□□ -1.47
SVIP-202ENST00000525670 OTOP2Q7RTS6 562 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 POLNQ7Z5Q5 900 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 SGMS1Q86VZ5 419 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 FAM133AQ8N9E0 248 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 PAWRQ96IZ0 340 aaKnown RBP5.88□□□□□ -1.47
SVIP-202ENST00000525670 DPYSL5Q9BPU6 564 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 SPZ1Q9BXG8 430 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 CELF4Q9BZC1 486 aaKnown RBP5.88□□□□□ -1.47
SVIP-202ENST00000525670 C22orf23Q9BZE7 217 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 C12orf65Q9H3J6 166 aaKnown RBP5.88□□□□□ -1.47
SVIP-202ENST00000525670 RIOX1Q9H6W3 641 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 UCKL1Q9NWZ5 548 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 TMEM260Q9NX78 707 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 VPS54Q9P1Q0 977 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 DDX20Q9UHI6 824 aaKnown RBP5.88□□□□□ -1.47
SVIP-202ENST00000525670 PUF60Q9UHX1 559 aaKnown RBP5.88□□□□□ -1.47
SVIP-202ENST00000525670 TPCN1Q9ULQ1 816 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 MRPL11Q9Y3B7 192 aaKnown RBP5.88□□□□□ -1.47
SVIP-202ENST00000525670 HS3ST3A1Q9Y663 406 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 RPTORQ8N122 1335 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 WDR19Q8NEZ3 1342 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 SYNRGQ9UMZ2 1314 aa5.88□□□□□ -1.47
SVIP-202ENST00000525670 CCDC163A0A0D9SF12 145 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 A0A0G2JNJ9 132 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 GCOM1H8Y6P7 765 aaPredicted RBP5.87□□□□□ -1.47
SVIP-202ENST00000525670 SCDO00767 359 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 CPLX1O14810 134 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 SUV39H1O43463 412 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 JAK2O60674 1132 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 ARIH2O95376 493 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 SGPL1O95470 568 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 GJB1P08034 283 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 MMEP08473 750 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 HOXC6P09630 235 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 POLR2MP0CAP2 368 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 CALM1P0DP23 149 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 CALM2P0DP24 149 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 CALM3P0DP25 149 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 RARBP10826 455 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 ACO1P21399 889 aaKnown RBP5.87□□□□□ -1.47
SVIP-202ENST00000525670 PDIA3P30101 505 aaKnown RBP5.87□□□□□ -1.47
SVIP-202ENST00000525670 RPS19P39019 145 aaKnown RBP5.87□□□□□ -1.47
SVIP-202ENST00000525670 GNAQP50148 359 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 DUSP8Q13202 625 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 ACVR2BQ13705 512 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 CCDC144BQ3MJ40 725 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 TRIM61Q5EBN2 209 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 JAKMIP3Q5VZ66 844 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 LRSAM1Q6UWE0 723 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 NOSTRINQ8IVI9 506 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 CCDC83Q8IWF9 413 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 ABRAQ8N0Z2 381 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 CISD2Q8N5K1 135 aaKnown RBP5.87□□□□□ -1.47
SVIP-202ENST00000525670 SLC7A14Q8TBB6 771 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 ASB15Q8WXK1 588 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 RMDN3Q96TC7 470 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 OR10A5Q9H207 317 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 XPNPEP3Q9NQH7 507 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 KCNH7Q9NS40 1196 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 GJB4Q9NTQ9 266 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 RBM28Q9NW13 759 aaKnown RBP5.87□□□□□ -1.47
SVIP-202ENST00000525670 Q9UFV3 132 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 CDC42EP3Q9UKI2 254 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 ZMYND8Q9ULU4 1186 aaPredicted RBP5.87□□□□□ -1.47
SVIP-202ENST00000525670 MYH7BA7E2Y1 1941 aa5.87□□□□□ -1.47
SVIP-202ENST00000525670 KBTBD13C9JR72 458 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 SEPT4O43236 478 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 RASGRP1O95267 797 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 NPTXRO95502 500 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 MYL3P08590 195 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 ZNF286BP0CG31 522 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 AKR1A1P14550 325 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 NT5C2P49902 561 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 MEOX1P50221 254 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 ADCY7P51828 1080 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 PSMC6P62333 389 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 AKAP17AQ02040 695 aaKnown RBP5.86□□□□□ -1.47
SVIP-202ENST00000525670 GUCY1B3Q02153 619 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms