RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 ZRANB3Q5FWF4 1079 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 TFAP2DQ7Z6R9 452 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 YAF2Q8IY57 180 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 DCP1BQ8IZD4 617 aaKnown RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 ADGRF2Q8IZF7 708 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 DCUN1D1Q96GG9 259 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 FAM163AQ96GL9 167 aaPredicted RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 KCTD10Q9H3F6 313 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 YY1AP1Q9H869 796 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 STARD7Q9NQZ5 370 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 PAK5Q9P286 719 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 PNMA8BQ9ULN7 279 aaPredicted RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 AIM2O14862 343 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 PGK1P00558 417 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 HSPA8P11142 646 aaKnown RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 HARS2P49590 506 aaKnown RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 ALDH5A1P51649 535 aaPredicted RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 GRIK4Q16099 956 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 LRRC8EQ6NSJ5 796 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 ARID3BQ8IVW6 561 aaPredicted RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 SHCBP1Q8NEM2 672 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 HAS1Q92839 578 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 SYNDIG1Q9H7V2 258 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 GEMIN8Q9NWZ8 242 aaKnown RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 PSMC3IPQ9P2W1 217 aaPredicted RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 KCNK1O00180 336 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 MGEA5O60502 916 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 VIL1P09327 827 aaKnown RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 GARTP22102 1010 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 IRAK1P51617 712 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 ST8SIA6P61647 398 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 C11orf63Q6NUN7 778 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 RBM43Q6ZSC3 357 aaKnown RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 REPS2Q8NFH8 660 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 ZNF473Q8WTR7 871 aaKnown RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 FBXO32Q969P5 355 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 FAM111AQ96PZ2 611 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 TUBB6Q9BUF5 446 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 TRIM54Q9BYV2 358 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 WARS2Q9UGM6 360 aaKnown RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 FRMPD1Q5SYB0 1578 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 LRRIQ3A6PVS8 624 aaPredicted RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 H0Y626 953 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 MEIS2O14770 477 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 SETSIPP0DME0 302 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 SREBF2Q12772 1141 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 CTXN3Q4LDR2 81 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 FBXO47Q5MNV8 452 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 DAB2IPQ5VWQ8 1189 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 ZNF467Q7Z7K2 595 aaPredicted RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 TRPM4Q8TD43 1214 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 CHST12Q9NRB3 414 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 SAE1Q9UBE0 346 aaPredicted RBP8.65□□□□□ -1.02
CHD7-203ENST00000525508 SFMBT1Q9UHJ3 866 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 SCOCQ9UIL1 159 aa8.65□□□□□ -1.02
CHD7-203ENST00000525508 EPHB6O15197 1021 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 SEC24DO94855 1032 aaPredicted RBP8.65□□□□□ -1.03
CHD7-203ENST00000525508 AGTP01019 485 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 POLBP06746 335 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 KCNA4P22459 653 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 ACADSBP45954 432 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 SLC20A2Q08357 652 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 CDH18Q13634 790 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 DDX39BQ13838 428 aaKnown RBP8.65□□□□□ -1.03
CHD7-203ENST00000525508 ZNF484Q5JVG2 852 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 PTRHD1Q6GMV3 140 aaKnown RBP8.65□□□□□ -1.03
CHD7-203ENST00000525508 AADACL2Q6P093 401 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 TMC7Q7Z402 723 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 XPO6Q96QU8 1125 aaKnown RBP8.65□□□□□ -1.03
CHD7-203ENST00000525508 HAUS8Q9BT25 410 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 ISCUQ9H1K1 167 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 OLFML3Q9NRN5 406 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 TSPAN16Q9UKR8 245 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 PKP3Q9Y446 797 aa8.65□□□□□ -1.03
CHD7-203ENST00000525508 SALL1Q9NSC2 1324 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 NCF1BA6NI72 391 aaPredicted RBP8.64□□□□□ -1.03
CHD7-203ENST00000525508 NCF1CA8MVU1 366 aaPredicted RBP8.64□□□□□ -1.03
CHD7-203ENST00000525508 PIAS1O75925 651 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 NCF1P14598 390 aaPredicted RBP8.64□□□□□ -1.03
CHD7-203ENST00000525508 TPH1P17752 444 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 TGM2P21980 687 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 PGM1P36871 562 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 RAD23BP54727 409 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 ESRRGP62508 458 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 PPP3CAQ08209 521 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 MFN1Q8IWA4 741 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 ICA1LQ8NDH6 482 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 LRRN4Q8WUT4 740 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 TMEM176AQ96HP8 235 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 GAD1Q99259 594 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 CGRRF1Q99675 332 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 DDX43Q9NXZ2 648 aaKnown RBP8.64□□□□□ -1.03
CHD7-203ENST00000525508 UTP6Q9NYH9 597 aaKnown RBP8.64□□□□□ -1.03
CHD7-203ENST00000525508 NOP53Q9NZM5 478 aaKnown RBP8.64□□□□□ -1.03
CHD7-203ENST00000525508 USP18Q9UMW8 372 aa8.64□□□□□ -1.03
CHD7-203ENST00000525508 ZSCAN9O15535 394 aaPredicted RBP8.64□□□□□ -1.03
CHD7-203ENST00000525508 PRPF4O43172 522 aaKnown RBP eCLIP8.64□□□□□ -1.03
CHD7-203ENST00000525508 SKAP2O75563 359 aaPredicted RBP8.64□□□□□ -1.03
CHD7-203ENST00000525508 H2AFXP16104 143 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms