RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 UCHL3P15374 230 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 ATF6P18850 670 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 FSHRP23945 695 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 ANXA13P27216 316 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 KCNQ1P51787 676 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 ZNF132P52740 706 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 SLC8A3P57103 927 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 BPIFB4P59827 614 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 NR1I3Q14994 352 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 CNGA2Q16280 664 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 TAF12Q16514 161 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 SGO2Q562F6 1265 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 GRASPQ7Z6J2 395 aaPredicted RBP13.13□□□□□ -0.31
CCS-202ENST00000525435 ADHFE1Q8IWW8 467 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 ANKRD52Q8NB46 1076 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 SLC2A14Q8TDB8 520 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 KAT5Q92993 513 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 TRMT2BQ96GJ1 504 aaKnown RBP13.13□□□□□ -0.31
CCS-202ENST00000525435 MED10Q9BTT4 135 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 NAA15Q9BXJ9 866 aaKnown RBP13.13□□□□□ -0.31
CCS-202ENST00000525435 LRRC3Q9BY71 257 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 DUSP16Q9BY84 665 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 ZNF518BQ9C0D4 1074 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 GPR88Q9GZN0 384 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 PNPLA8Q9NP80 782 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
CCS-202ENST00000525435 ASAH2Q9NR71 780 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 UXTQ9UBK9 157 aaPredicted RBP13.13□□□□□ -0.31
CCS-202ENST00000525435 CLUHO75153 1309 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 SPTBN5Q9NRC6 3674 aaKnown RBP13.12□□□□□ -0.31
CCS-202ENST00000525435 XIRP2A4UGR9 3374 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 NOL4O94818 638 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 FAM200BP0CF97 657 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 HMGA1P17096 107 aaKnown RBP13.12□□□□□ -0.31
CCS-202ENST00000525435 PPP3CCP48454 512 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 FANCCQ00597 558 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 SYCP1Q15431 976 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 MEA1Q16626 185 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 DDR2Q16832 855 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 CCDC142Q17RM4 750 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 DENND5BQ6ZUT9 1274 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 PDZD4Q76G19 769 aaPredicted RBP13.12□□□□□ -0.31
CCS-202ENST00000525435 FAM35AQ86V20 835 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 SCN4BQ8IWT1 228 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 FAM71AQ8IYT1 594 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 RBBP8NLQ8NC74 664 aaPredicted RBP13.12□□□□□ -0.31
CCS-202ENST00000525435 ACSF2Q96CM8 615 aaPredicted RBP13.12□□□□□ -0.31
CCS-202ENST00000525435 LPIN3Q9BQK8 851 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 CORO1BQ9BR76 489 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 LSM14BQ9BX40 385 aaKnown RBP13.12□□□□□ -0.31
CCS-202ENST00000525435 POMKQ9H5K3 350 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 GDE1Q9NZC3 331 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 IL37Q9NZH6 218 aa13.12□□□□□ -0.31
CCS-202ENST00000525435 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
CCS-202ENST00000525435 TSC2P49815 1807 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 C19orf67A6NJJ6 358 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 SLC38A8A6NNN8 435 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 LOC730098B7Z3J9 87 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 F8VP50 259 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 RNF225M0QZC1 329 aaPredicted RBP13.11□□□□□ -0.31
CCS-202ENST00000525435 FOXN3O00409 490 aaPredicted RBP13.11□□□□□ -0.31
CCS-202ENST00000525435 CLDN5O00501 218 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 MED7O43513 233 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 AP1G2O75843 785 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 SOAT2O75908 522 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 RTN3O95197 1032 aaPredicted RBP13.11□□□□□ -0.31
CCS-202ENST00000525435 TPM3P06753 285 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 KRT5P13647 590 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 CCDC130P13994 396 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 IL9P15248 144 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 CD19P15391 556 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 NPR3P17342 541 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 CDC25CP30307 473 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 UBASH3AP57075 661 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 PTK2Q05397 1052 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 ORC1Q13415 861 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 DRAP1Q14919 205 aaPredicted RBP13.11□□□□□ -0.31
CCS-202ENST00000525435 PRSS36Q5K4E3 855 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 PPP1R26Q5T8A7 1209 aaPredicted RBP13.11□□□□□ -0.31
CCS-202ENST00000525435 GJB7Q6PEY0 223 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 LCLAT1Q6UWP7 414 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 FMNL3Q8IVF7 1028 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 ZDHHC14Q8IZN3 488 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 NUP93Q8N1F7 819 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 NEK11Q8NG66 645 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 NXPE3Q969Y0 559 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 NAP1L5Q96NT1 182 aaPredicted RBP13.11□□□□□ -0.31
CCS-202ENST00000525435 SMOQ99835 787 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 TTLL2Q9BWV7 592 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 EDEM3Q9BZQ6 932 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 KRT82Q9NSB4 513 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 FAM49BQ9NUQ9 324 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 HCFC1R1Q9NWW0 138 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 EPS15L1Q9UBC2 864 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 HESX1Q9UBX0 185 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 CDH7Q9ULB5 785 aa13.11□□□□□ -0.31
CCS-202ENST00000525435 PLXNA3P51805 1871 aa13.1□□□□□ -0.31
CCS-202ENST00000525435 O00370 1275 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms