RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 PDCL2Q8N4E4 241 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 CPA6Q8N4T0 437 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 LEO1Q8WVC0 666 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 OSCP1Q8WVF1 389 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 EZH1Q92800 747 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 GBP4Q96PP9 640 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 SLC22A12Q96S37 553 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 CYP2S1Q96SQ9 504 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 LSM14BQ9BX40 385 aaKnown RBP10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 ECT2Q9H8V3 914 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 VPS45Q9NRW7 570 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 DUS2Q9NX74 493 aaKnown RBP10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 DDX43Q9NXZ2 648 aaKnown RBP10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 FAM13BQ9NYF5 915 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 L1RE1Q9UN81 338 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 WNT6Q9Y6F9 365 aa10.28□□□□□ -0.76
TRAPPC4-206ENST00000525303 AKAP13Q12802 2813 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 IGF2RP11717 2491 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 GOLGA6L22H0YM25 854 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 NOL4O94818 638 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 APBB3O95704 486 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 CKMP06732 381 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 USP17L7P0C7H9 530 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 PNPLA4P41247 253 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 IFNAR2P48551 515 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 RPL10AP62906 217 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 SHC2P98077 582 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 MYL7Q01449 175 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 POU5F1Q01860 360 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 CREB5Q02930 508 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 DMC1Q14565 340 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 ELF2Q15723 593 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 ZNF77Q15935 545 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 CCDC142Q17RM4 750 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 EML3Q32P44 896 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 INTS6LQ5JSJ4 861 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 SCARA3Q6AZY7 606 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 CCDC73Q6ZRK6 1079 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 DYMQ7RTS9 669 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 SFR1Q86XK3 245 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 C1orf127Q8N9H9 656 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 ZSWIM2Q8NEG5 633 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 CD101Q93033 1021 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 ATP2A3Q93084 1043 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 HVCN1Q96D96 273 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 SAAL1Q96ER3 474 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 TRMT2BQ96GJ1 504 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 ACBD6Q9BR61 282 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 FAM213AQ9BRX8 229 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 ABCB6Q9NP58 842 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 UXTQ9UBK9 157 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 GTF3C4Q9UKN8 822 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 PCDHA7Q9UN72 937 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 AGAP1Q9UPQ3 857 aa10.27□□□□□ -0.77
TRAPPC4-206ENST00000525303 ZZEF1O43149 2961 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 TRAV19A0A0A6YYK7 116 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 A0A1W2PQ27 194 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 A0A1W2PQ64 194 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 A0A1W2PQD8 194 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 HCRTO43612 131 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 HUS1O60921 280 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 PPP1R37O75864 691 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 RHOBTB1O94844 696 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 CAVIN2O95810 425 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 GBP1P32455 592 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 DGKEP52429 567 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 KCNA1Q09470 495 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 USP4Q13107 963 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 POSTNQ15063 836 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 PSAPL1Q6NUJ1 521 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 CLEC17AQ6ZS10 378 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 USP49Q70CQ1 688 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 OSTM1Q86WC4 334 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 BRSK2Q8IWQ3 736 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 SCN4BQ8IWT1 228 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 TMEM86AQ8N2M4 240 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 ARL14EPQ8N8R7 260 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 FSIP1Q8NA03 581 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 ACDQ96AP0 544 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 CCDC34Q96HJ3 373 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 FAM84AQ96KN4 292 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 MYRFLQ96LU7 910 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 CLIC6Q96NY7 704 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 PKMYT1Q99640 499 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 EDEM2Q9BV94 578 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 CUEDC2Q9H467 287 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 TMEM206Q9H813 350 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 MRPL44Q9H9J2 332 aaKnown RBP10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 RBAKQ9NYW8 714 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 TBC1D7Q9P0N9 293 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 STK17AQ9UEE5 414 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 EBF1Q9UH73 591 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 INVSQ9Y283 1065 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 SNX9Q9Y5X1 595 aa10.26□□□□□ -0.77
TRAPPC4-206ENST00000525303 BCLAF3A2AJT9 711 aaKnown RBP10.25□□□□□ -0.77
TRAPPC4-206ENST00000525303 C2orf78A6NCI8 922 aa10.25□□□□□ -0.77
TRAPPC4-206ENST00000525303 C4orf47A7E2U8 309 aa10.25□□□□□ -0.77
TRAPPC4-206ENST00000525303 KRT19P08727 400 aa10.25□□□□□ -0.77
TRAPPC4-206ENST00000525303 CMA1P23946 247 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms