RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 SGSM1Q2NKQ1 1148 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 ZSCAN23Q3MJ62 389 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 ZACNQ401N2 412 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 DCAF17Q5H9S7 520 aaPredicted RBP13.04□□□□□ -0.32
CHKA-203ENST00000525155 LMBRD2Q68DH5 695 aaPredicted RBP13.04□□□□□ -0.32
CHKA-203ENST00000525155 TXNDC11Q6PKC3 985 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 SV2AQ7L0J3 742 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 TMEM150AQ86TG1 271 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 METTL23Q86XA0 190 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 ARID3BQ8IVW6 561 aaPredicted RBP13.04□□□□□ -0.32
CHKA-203ENST00000525155 ANKRD20A12PQ8NF67 263 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 SPATA18Q8TC71 538 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 DNASE1L2Q92874 299 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 PSMG2Q969U7 264 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 HPDLQ96IR7 371 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 FAXDC2Q96IV6 333 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 LPIN3Q9BQK8 851 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 ZCWPW1Q9H0M4 648 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 GZF1Q9H116 711 aaPredicted RBP13.04□□□□□ -0.32
CHKA-203ENST00000525155 LMAN1LQ9HAT1 526 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 PRMT8Q9NR22 394 aaPredicted RBP13.04□□□□□ -0.32
CHKA-203ENST00000525155 ASAH2Q9NR71 780 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 GDAP2Q9NXN4 497 aa13.04□□□□□ -0.32
CHKA-203ENST00000525155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHKA-203ENST00000525155 CYB561D2O14569 222 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 HUS1O60921 280 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 EEF1GP26641 437 aaKnown RBP13.03□□□□□ -0.32
CHKA-203ENST00000525155 MXI1P50539 228 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 DLG4P78352 724 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 FCHO2Q0JRZ9 810 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 ANO6Q4KMQ2 910 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 TDRD10Q5VZ19 366 aaKnown RBP13.03□□□□□ -0.32
CHKA-203ENST00000525155 DPH6Q7L8W6 267 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 TRIM59Q8IWR1 403 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 TMEM86AQ8N2M4 240 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 RIN3Q8TB24 985 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 PLEKHO2Q8TD55 490 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 ZNF516Q92618 1163 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 ZFYVE19Q96K21 471 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 CHRDQ9H2X0 955 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 VRTNQ9H8Y1 702 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 RBM12Q9NTZ6 932 aaKnown RBP13.03□□□□□ -0.32
CHKA-203ENST00000525155 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 NFE2L3Q9Y4A8 694 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 PTPRJQ12913 1337 aa13.03□□□□□ -0.32
CHKA-203ENST00000525155 ZNF263O14978 683 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 PRAMEF12O95522 483 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 TRIM49P0CI25 452 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 TRIM49CP0CI26 452 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 HMGA1P17096 107 aaKnown RBP13.02□□□□□ -0.33
CHKA-203ENST00000525155 PIK3CAP42336 1068 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 MTIF2P46199 727 aaKnown RBP13.02□□□□□ -0.33
CHKA-203ENST00000525155 GCLMP48507 274 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 EPHB3P54753 998 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 TNNC1P63316 161 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 TPM4P67936 248 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 DMWDQ09019 674 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 CCDC142Q17RM4 750 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 ZNF699Q32M78 642 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 SLC39A12Q504Y0 691 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 C1orf220Q5T0J3 134 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 THEM5Q8N1Q8 247 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 ELMOD1Q8N336 334 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 TOP6BLQ8N6T0 577 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 LEMD2Q8NC56 503 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 FBXL13Q8NEE6 735 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 TTC8Q8TAM2 541 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 GIPC2Q8TF65 315 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 FAM3CQ92520 227 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 RUBCNQ92622 972 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 IRF7Q92985 503 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 SLC35C1Q96A29 364 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 CHFRQ96EP1 664 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 CNOT6LQ96LI5 555 aaKnown RBP13.02□□□□□ -0.33
CHKA-203ENST00000525155 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 DNAI2Q9GZS0 605 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 SMG9Q9H0W8 520 aaKnown RBP13.02□□□□□ -0.33
CHKA-203ENST00000525155 ZSCAN32Q9NX65 697 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 PIAS3Q9Y6X2 628 aa13.02□□□□□ -0.33
CHKA-203ENST00000525155 OTOL1A6NHN0 477 aaPredicted RBP13.01□□□□□ -0.33
CHKA-203ENST00000525155 BECN2A8MW95 431 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 MAN2B1O00754 1011 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 HCRTO43612 131 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 CLSTN1O94985 981 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 CST3P01034 146 aaPredicted RBP13.01□□□□□ -0.33
CHKA-203ENST00000525155 AFPP02771 609 aaKnown RBP13.01□□□□□ -0.33
CHKA-203ENST00000525155 GABRR2P28476 465 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 MAGEA9P43362 315 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 ALDH1A3P47895 512 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 GPR15P49685 360 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 ZNF165P49910 485 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 CYP4F8P98187 520 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 SATB1Q01826 763 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 TNK2Q07912 1038 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 PPP3CAQ08209 521 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 C11orf57Q6ZUT1 292 aaPredicted RBP13.01□□□□□ -0.33
CHKA-203ENST00000525155 OSTM1Q86WC4 334 aa13.01□□□□□ -0.33
CHKA-203ENST00000525155 CREBRFQ8IUR6 639 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms