RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 LAMTOR5O43504 91 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 C4BPAP04003 597 aaKnown RBP19.8■□□□□ 0.76
CAPN1-203ENST00000525013 SP9P0CG40 484 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 PTPN1P18031 435 aaKnown RBP19.8■□□□□ 0.76
CAPN1-203ENST00000525013 NR2F2P24468 414 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 CCNE1P24864 410 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 ANXA13P27216 316 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 KCNB1Q14721 858 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 SCARA5Q6ZMJ2 495 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 ASCL5Q7RTU5 278 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 MON1AQ86VX9 555 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 TMC2Q8TDI7 906 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 ELMO3Q96BJ8 720 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 MYRFLQ96LU7 910 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 DPEP3Q9H4B8 488 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 SMYD3Q9H7B4 428 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 TRAF3IP3Q9Y228 551 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 NME7Q9Y5B8 376 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 R4GN57 208 aa19.8■□□□□ 0.76
CAPN1-203ENST00000525013 VNN1O95497 513 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 RPS9P46781 194 aaKnown RBP19.79■□□□□ 0.76
CAPN1-203ENST00000525013 SOX9P48436 509 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 CDH8P55286 799 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 PLCB2Q00722 1185 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 PNOCQ13519 176 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 GUF1Q8N442 669 aaKnown RBP19.79■□□□□ 0.76
CAPN1-203ENST00000525013 TTC16Q8NEE8 873 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 USP13Q92995 863 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-203ENST00000525013 C8orf33Q9H7E9 229 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-203ENST00000525013 TDP1Q9NUW8 608 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 GTSE1Q9NYZ3 720 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 CCL26Q9Y258 94 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 FANCMQ8IYD8 2048 aa19.79■□□□□ 0.76
CAPN1-203ENST00000525013 PRR23AA6NEV1 266 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 TRIM66O15016 1216 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 TADA3O75528 432 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 RPL13P26373 211 aaKnown RBP19.78■□□□□ 0.76
CAPN1-203ENST00000525013 RAP1GAPP47736 663 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 VAMP7P51809 220 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 MLLT6P55198 1093 aaPredicted RBP19.78■□□□□ 0.76
CAPN1-203ENST00000525013 FZD5Q13467 585 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 SGSM1Q2NKQ1 1148 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 DENND5BQ6ZUT9 1274 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 B3GALNT2Q8NCR0 500 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 SPATA17Q96L03 361 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 VRTNQ9H8Y1 702 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 LMAN1LQ9HAT1 526 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 GKN1Q9NS71 199 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 MYO15AQ9UKN7 3530 aa19.78■□□□□ 0.76
CAPN1-203ENST00000525013 TRAV19A0A0A6YYK7 116 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 SOBPA7XYQ1 873 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 F8VP50 259 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 SPECC1L-ADORA2AF8WAN1 911 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 IKBKBO14920 756 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 CKMP06732 381 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 KRT13P13646 458 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 P4HA1P13674 534 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 PIK3CAP42336 1068 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 CSTF1Q05048 431 aaKnown RBP19.77■□□□□ 0.76
CAPN1-203ENST00000525013 TNK2Q07912 1038 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 ZACNQ401N2 412 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 CC2D1AQ6P1N0 951 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-203ENST00000525013 ZC3H14Q6PJT7 736 aaKnown RBP19.77■□□□□ 0.76
CAPN1-203ENST00000525013 SV2AQ7L0J3 742 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 SMYD4Q8IYR2 804 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-203ENST00000525013 MAML2Q8IZL2 1156 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-203ENST00000525013 FMR1NBQ8N0W7 255 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-203ENST00000525013 MSANTD3Q96H12 275 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 CYP2S1Q96SQ9 504 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 ELOVL4Q9GZR5 314 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 KIF9Q9HAQ2 790 aa19.77■□□□□ 0.76
CAPN1-203ENST00000525013 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.77■□□□□ 0.76
CAPN1-203ENST00000525013 ATG2BQ96BY7 2078 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 CLDN5O00501 218 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 MAPK13O15264 365 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 AKAP3O75969 853 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 USP17L7P0C7H9 530 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 CTHP32929 405 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 USP46P62068 366 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 MTAPQ13126 283 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 ADAM9Q13443 819 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 NFIL3Q16649 462 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 ITPRIPL2Q3MIP1 535 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 C1orf220Q5T0J3 134 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 C1orf228Q6PIY5 440 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 INTS8Q75QN2 995 aaKnown RBP19.76■□□□□ 0.75
CAPN1-203ENST00000525013 RALGPS2Q86X27 583 aaPredicted RBP19.76■□□□□ 0.75
CAPN1-203ENST00000525013 FAM186BQ8IYM0 893 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 ZNF687Q8N1G0 1237 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 CEP295NLQ96MC4 621 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 SLC22A12Q96S37 553 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 B3GNT5Q9BYG0 378 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 ZNF518BQ9C0D4 1074 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 RMND1Q9NWS8 449 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 EHD2Q9NZN4 543 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 FBXO4Q9UKT5 387 aa19.76■□□□□ 0.75
CAPN1-203ENST00000525013 C2orf78A6NCI8 922 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 HLA-DRAP01903 254 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 TRIM49P0CI25 452 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 TRIM49CP0CI26 452 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms