RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 GABBR2O75899 941 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 MICAL2O94851 1124 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 ASGR2P07307 311 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 SRGAP2BP0DMP2 458 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 BMP1P13497 986 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 UCHL3P15374 230 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 HMGA1P17096 107 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 HOXB8P17481 243 aaPredicted RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 PAX3P23760 479 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 FSHRP23945 695 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 TBXAS1P24557 533 aaPredicted RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 ANXA13P27216 316 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 GABRR2P28476 465 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 CLCN1P35523 988 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 PGFP49763 221 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 EPHB3P54753 998 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 UBASH3AP57075 661 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 GCNT1Q02742 428 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 PDE4CQ08493 712 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 SMAD4Q13485 552 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 TEAD2Q15562 447 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 TAF12Q16514 161 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 NFE2Q16621 373 aaPredicted RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 PABPC1LQ4VXU2 614 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 C2CD6Q53TS8 623 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 SGO2Q562F6 1265 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 ATAT1Q5SQI0 421 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 C4orf50Q6ZRC1 276 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 CLEC20AQ6ZU45 233 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 DNAJB7Q7Z6W7 309 aaPredicted RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 PHLDB2Q86SQ0 1253 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC47A2Q86VL8 602 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 UNC93AQ86WB7 457 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 TTC30AQ86WT1 665 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 DNAAF5Q86Y56 855 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 GPR65Q8IYL9 337 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 CRYBG2Q8N1P7 616 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 ZMIZ2Q8NF64 920 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 NEK11Q8NG66 645 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 SHKBP1Q8TBC3 707 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 SPPL2BQ8TCT7 592 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC20A1Q8WUM9 679 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 ZNF512Q96ME7 567 aaPredicted RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 ZSWIM3Q96MP5 696 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 MYADMQ96S97 322 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 CYP2S1Q96SQ9 504 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 RPP25Q9BUL9 199 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 GPR88Q9GZN0 384 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 MIS12Q9H081 205 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 ATXN3LQ9H3M9 355 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 TRPC7Q9HCX4 862 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 ZDHHC7Q9NXF8 308 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 TJP2Q9UDY2 1190 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 CHORDC1Q9UHD1 332 aaPredicted RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 NUDT5Q9UKK9 219 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 TSPAN16Q9UKR8 245 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 COG5Q9UP83 839 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 MRPS23Q9Y3D9 190 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 SCN1AP35498 2009 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 CLUHO75153 1309 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 TSC2P49815 1807 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 PLXNA3P51805 1871 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 CITO14578 2027 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 PRRC2BQ5JSZ5 2229 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 GTPBP10A4D1E9 387 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 C2orf78A6NCI8 922 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 LRRC10BA6NIK2 292 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 HHLA1C9JL84 531 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 F8VZ95 297 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 M0QYV0 167 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 O00370 1275 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 MDM4O15151 490 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 NCK2O43639 380 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 MOSPD3O75425 235 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 TADA3O75528 432 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC34A2O95436 690 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 MMEP08473 750 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 HNRNPA1P09651 372 aaKnown RBP eCLIP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 FAM200BP0CF97 657 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 VDRP11473 427 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SKILP12757 684 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 LCP1P13796 627 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 PTPN2P17706 415 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 GNA15P30679 374 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 VIPR2P41587 438 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 MTHFRP42898 656 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 TUFMP49411 452 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 ZNF132P52740 706 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC5A3P53794 718 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 YWHAEP62258 255 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 RPL10AP62906 217 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 ITIH3Q06033 890 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 NR1I3Q14994 352 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 VEPH1Q14D04 833 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 MAPRE1Q15691 268 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 UVSSAQ2YD98 709 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 CFAP221Q4G0U5 840 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 FILIP1LQ4L180 1135 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 GPR158Q5T848 1215 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 CYP4A22Q5TCH4 519 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms