RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 JAM3Q9BX67 310 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 PCGF6Q9BYE7 350 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 DOPEY2Q9Y3R5 2298 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 A0A087WV48 116 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 A0A1W2PQJ5 194 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 C22orf46C9J442 243 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 H7BY64 318 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 ARIH2O95376 493 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 NDUFB10O96000 172 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 CKMP06732 381 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 PYGMP11217 842 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 GP1BBP13224 206 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 LAG3P18627 525 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 EDNRBP24530 442 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 CDKN1CP49918 316 aaPredicted RBP8.03□□□□□ -1.12
NEDD8-203ENST00000524927 CSRP3P50461 194 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 GPC5P78333 572 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 KRT17Q04695 432 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 CHRNEQ04844 493 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 KLRC3Q07444 240 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 HTR4Q13639 388 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 DHCR24Q15392 516 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 HSF5Q4G112 596 aaPredicted RBP8.03□□□□□ -1.12
NEDD8-203ENST00000524927 GORABQ5T7V8 394 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 LONP2Q86WA8 852 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 CELF4Q9BZC1 486 aaKnown RBP8.03□□□□□ -1.12
NEDD8-203ENST00000524927 JADE2Q9NQC1 790 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 DDX56Q9NY93 547 aaKnown RBP8.03□□□□□ -1.12
NEDD8-203ENST00000524927 DKK4Q9UBT3 224 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 ZKSCAN5Q9Y2L8 839 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 COA3Q9Y2R0 106 aaPredicted RBP8.03□□□□□ -1.12
NEDD8-203ENST00000524927 MRPS17Q9Y2R5 130 aaKnown RBP8.03□□□□□ -1.12
NEDD8-203ENST00000524927 TAF6LQ9Y6J9 622 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 LCTP09848 1927 aa8.03□□□□□ -1.12
NEDD8-203ENST00000524927 SDK1Q7Z5N4 2213 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 ZNF286BP0CG31 522 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 GHRP10912 638 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 ALAS1P13196 640 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 EPCAMP16422 314 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 FPR2P25090 351 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 PPM1AP35813 382 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 RAP1GAPP47736 663 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 PFKPQ01813 784 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 ADCY1Q08828 1119 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 SRSF5Q13243 272 aaKnown RBP8.02□□□□□ -1.13
NEDD8-203ENST00000524927 LPIN1Q14693 890 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 CRY1Q16526 586 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 TMEM177Q53S58 311 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 GALNT18Q6P9A2 607 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 SLC23A3Q6PIS1 610 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 TMED8Q6PL24 325 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-203ENST00000524927 CYP26C1Q6V0L0 522 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 RPAP2Q8IXW5 612 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-203ENST00000524927 NXPE1Q8N323 547 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 CISD2Q8N5K1 135 aaKnown RBP8.02□□□□□ -1.13
NEDD8-203ENST00000524927 LZTR1Q8N653 840 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 MIGA1Q8NAN2 632 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 PDZD8Q8NEN9 1154 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 PANK1Q8TE04 598 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 SLC22A17Q8WUG5 538 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 FTHL17Q9BXU8 183 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 RHOBTB2Q9BYZ6 727 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 WDR6Q9NNW5 1121 aaKnown RBP8.02□□□□□ -1.13
NEDD8-203ENST00000524927 MCM9Q9NXL9 1143 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 IMPACTQ9P2X3 320 aa8.02□□□□□ -1.13
NEDD8-203ENST00000524927 ZNF503-AS2A6NEH8 195 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 SHISA7A6NL88 538 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 B4DLN1 442 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 CBX4O00257 560 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 GAS7O60861 476 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 PPP1R11O60927 126 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-203ENST00000524927 PPFIA4O75335 1185 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 MAFO75444 373 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-203ENST00000524927 CHRNA1P02708 482 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 GNAT1P11488 350 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 LAMP2P13473 410 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 SCG2P13521 617 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 MPLP40238 635 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 FNTBP49356 437 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 GATMP50440 423 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 MRPL12P52815 198 aaKnown RBP8.01□□□□□ -1.13
NEDD8-203ENST00000524927 BAATQ14032 418 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-203ENST00000524927 SKOR2Q2VWA4 1001 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-203ENST00000524927 MUM1L1Q5H9M0 696 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 RTN4RL1Q86UN2 441 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-203ENST00000524927 FERMT3Q86UX7 667 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 KIF18BQ86Y91 864 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 DEFB124Q8NES8 71 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 NUP43Q8NFH3 380 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 PPTC7Q8NI37 304 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 FEZF2Q8TBJ5 459 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 TSR2Q969E8 191 aaKnown RBP8.01□□□□□ -1.13
NEDD8-203ENST00000524927 TTC1Q99614 292 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 KRTAP4-5Q9BYR2 181 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 SLC32A1Q9H598 525 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 TYW1Q9NV66 732 aaKnown RBP8.01□□□□□ -1.13
NEDD8-203ENST00000524927 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.01□□□□□ -1.13
NEDD8-203ENST00000524927 NUMBLQ9Y6R0 609 aa8.01□□□□□ -1.13
NEDD8-203ENST00000524927 FITM1A5D6W6 292 aa8□□□□□ -1.13
NEDD8-203ENST00000524927 ZNF891A8MT65 544 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms