RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ZNF711Q9Y462 761 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 KRT38O76015 456 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 RHOCP08134 193 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 GAS2L3Q86XJ1 694 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 MAP4K3Q8IVH8 894 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 ZNF507Q8TCN5 953 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 EIF2AQ9BY44 585 aaKnown RBP17.79■□□□□ 0.44
BEST1-203ENST00000524877 ACTR5Q9H9F9 607 aaPredicted RBP17.79■□□□□ 0.44
BEST1-203ENST00000524877 PPARDQ03181 441 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 GRIK3Q13003 919 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 KLHL38Q2WGJ6 581 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 ACAD10Q6JQN1 1059 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 FAM210AQ96ND0 272 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 CFAP69A5D8W1 941 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 CFAP99D6REC4 459 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 TMCC1O94876 653 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 MAP4P27816 1152 aaKnown RBP17.78■□□□□ 0.44
BEST1-203ENST00000524877 GALCP54803 685 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 CISHQ9NSE2 258 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 GLRA2P23416 452 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 AMIGO3Q86WK7 504 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 FIS1Q9Y3D6 152 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 EPHB2P29323 1055 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 PTPN11Q06124 597 aaPredicted RBP17.78■□□□□ 0.44
BEST1-203ENST00000524877 RABGGTAQ92696 567 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 DCLK3Q9C098 648 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 CIPCQ9C0C6 399 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 ASAH2Q9NR71 780 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 TMEM51Q9NW97 253 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 GLE1Q53GS7 698 aaKnown RBP17.78■□□□□ 0.44
BEST1-203ENST00000524877 SYN2Q92777 582 aaPredicted RBP17.78■□□□□ 0.44
BEST1-203ENST00000524877 ACSF2Q96CM8 615 aaPredicted RBP17.78■□□□□ 0.44
BEST1-203ENST00000524877 IL17RAQ96F46 866 aa17.78■□□□□ 0.44
BEST1-203ENST00000524877 COL1A1P02452 1464 aaPredicted RBP17.78■□□□□ 0.44
BEST1-203ENST00000524877 ATP9BO43861 1147 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 SHROOM1Q2M3G4 852 aaPredicted RBP17.77■□□□□ 0.44
BEST1-203ENST00000524877 SH3D19Q5HYK7 790 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 GPR63Q9BZJ6 419 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 VPS28Q9UK41 221 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 TSC22D4Q9Y3Q8 395 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 SLC9A3R1O14745 358 aaPredicted RBP17.77■□□□□ 0.44
BEST1-203ENST00000524877 RPL9P32969 192 aaKnown RBP17.77■□□□□ 0.44
BEST1-203ENST00000524877 SLC12A3P55017 1021 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 PSMD6Q15008 389 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 NAB2Q15742 525 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 BOLA3Q53S33 107 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 OLFML2BQ68BL8 750 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 TTC7AQ9ULT0 858 aaPredicted RBP17.77■□□□□ 0.44
BEST1-203ENST00000524877 LSM8O95777 96 aaKnown RBP17.77■□□□□ 0.44
BEST1-203ENST00000524877 FPGSQ05932 587 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 SNF8Q96H20 258 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 KLHL14Q9P2G3 628 aa17.77■□□□□ 0.44
BEST1-203ENST00000524877 EPC2Q52LR7 807 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 GJB7Q6PEY0 223 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 SLC30A9Q6PML9 568 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 ULK4Q96C45 1275 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 PNMA5Q96PV4 448 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 MTMR9Q96QG7 549 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 ZNF212Q9UDV6 495 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 CCDC151A5D8V7 595 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 CXCL14O95715 111 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 SMPD1P17405 629 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 ACAT1P24752 427 aaKnown RBP17.77■□□□□ 0.43
BEST1-203ENST00000524877 GEMIN4P57678 1058 aaKnown RBP17.77■□□□□ 0.43
BEST1-203ENST00000524877 MEI1Q5TIA1 1274 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 PSRC1Q6PGN9 363 aaPredicted RBP17.77■□□□□ 0.43
BEST1-203ENST00000524877 TRIM59Q8IWR1 403 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 ZNF557Q8N988 423 aaPredicted RBP17.77■□□□□ 0.43
BEST1-203ENST00000524877 SKA1Q96BD8 255 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 RNF186Q9NXI6 227 aa17.77■□□□□ 0.43
BEST1-203ENST00000524877 ZMYND8Q9ULU4 1186 aaPredicted RBP17.77■□□□□ 0.43
BEST1-203ENST00000524877 TRAV19A0A0A6YYK7 116 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 HGSO14964 777 aaPredicted RBP17.76■□□□□ 0.43
BEST1-203ENST00000524877 DCLRE1AQ6PJP8 1040 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 RRN3Q9NYV6 651 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 G3BP2Q9UN86 482 aaKnown RBP17.76■□□□□ 0.43
BEST1-203ENST00000524877 RIPK3Q9Y572 518 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 DUOX1Q9NRD9 1551 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 LZTS3O60299 673 aaPredicted RBP17.76■□□□□ 0.43
BEST1-203ENST00000524877 PON1P27169 355 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 TIGD7Q6NT04 549 aaPredicted RBP17.76■□□□□ 0.43
BEST1-203ENST00000524877 SENP8Q96LD8 212 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 SCUBE2Q9NQ36 999 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 SPG21Q9NZD8 308 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 NOP53Q9NZM5 478 aaKnown RBP17.76■□□□□ 0.43
BEST1-203ENST00000524877 BAG5Q9UL15 447 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 PKP3Q9Y446 797 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 ATRNL1Q5VV63 1379 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 PRR23AA6NEV1 266 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 SERPINI2O75830 405 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 FGF19O95750 216 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 NDST1P52848 882 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 DNAJC17Q9NVM6 304 aaKnown RBP17.76■□□□□ 0.43
BEST1-203ENST00000524877 PTK7Q13308 1070 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 PCSK7Q16549 785 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 TRIM65Q6PJ69 517 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 TRIM48Q8IWZ4 208 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 KIAA0319LQ8IZA0 1049 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.76■□□□□ 0.43
BEST1-203ENST00000524877 SMIM22K7EJ46 135 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms