RNA–Protein interactions for RNA: ENST00000523842.1

EFCAB13-212, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-212ENST00000523842 KIRREL2Q6UWL6 708 aa3.43□□□□□ -1.86
EFCAB13-212ENST00000523842 TRIM72Q6ZMU5 477 aa3.43□□□□□ -1.86
EFCAB13-212ENST00000523842 Q6ZWC4 215 aa3.43□□□□□ -1.86
EFCAB13-212ENST00000523842 PRR18Q8N4B5 295 aa3.43□□□□□ -1.86
EFCAB13-212ENST00000523842 HOMER2Q9NSB8 354 aa3.43□□□□□ -1.86
EFCAB13-212ENST00000523842 GNL3LQ9NVN8 582 aaKnown RBP3.43□□□□□ -1.86
EFCAB13-212ENST00000523842 TUBA8Q9NY65 449 aaPredicted RBP3.43□□□□□ -1.86
EFCAB13-212ENST00000523842 PCDHA6Q9UN73 950 aa3.43□□□□□ -1.86
EFCAB13-212ENST00000523842 FNDC1Q4ZHG4 1894 aaPredicted RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 FCHO1O14526 889 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 ERC2O15083 957 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 TLR5O60602 858 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 SOAT2O75908 522 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 GNAI2P04899 355 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 POU2F2P09086 479 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 CYP2A6P11509 494 aaPredicted RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 TYRP14679 529 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 ATP5F1P24539 256 aaPredicted RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 TKTP29401 623 aaKnown RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 CCKBRP32239 447 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 RECQLP46063 649 aaPredicted RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 PXNP49023 591 aaPredicted RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 TRIM71Q2Q1W2 868 aaKnown RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 ZIK1Q3SY52 487 aaPredicted RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 PARS2Q7L3T8 475 aaKnown RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 SAMD14Q8IZD0 417 aaPredicted RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 FAM177A1Q8N128 213 aaPredicted RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 GTPBP4Q9BZE4 634 aaKnown RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 GLOD4Q9HC38 313 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 LMBRD1Q9NUN5 540 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 LPAR3Q9UBY5 353 aa3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 NDRG4Q9ULP0 352 aaKnown RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 SCAF8Q9UPN6 1271 aaKnown RBP3.42□□□□□ -1.86
EFCAB13-212ENST00000523842 LOC105371045A0A1W2PR82 267 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 TCRBV5S1A1TA0A578 114 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 ANKRD62A6NC57 917 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 E5RJQ4 531 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 AP4M1O00189 453 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 CSF1RP07333 972 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 NPSP0C0P6 89 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 SNHG28P0DPA3 235 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 RENBPP51606 427 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 POLGP54098 1239 aaPredicted RBP3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 GPSM2P81274 684 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 PLS1Q14651 629 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 CYP1B1Q16678 543 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 RNASE12Q5GAN4 147 aaKnown RBP3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 PXDC1Q5TGL8 231 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 SHC4Q6S5L8 630 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 LAYNQ6UX15 382 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 USP45Q70EL2 814 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 WDR53Q7Z5U6 358 aaPredicted RBP3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 MIER2Q8N344 545 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 TERB1Q8NA31 727 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 HOOK2Q96ED9 719 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 HMCESQ96FZ2 354 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 THAP7Q9BT49 309 aaPredicted RBP3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 EFHD1Q9BUP0 239 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 PTDSS2Q9BVG9 487 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 CIPCQ9C0C6 399 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 EBF3Q9H4W6 596 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 CXorf36Q9H7Y0 433 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 ARMT1Q9H993 441 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 FEZ2Q9UHY8 353 aaPredicted RBP3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 ZDHHC8Q9ULC8 765 aa3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 LUC7L2Q9Y383 392 aaKnown RBP3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.41□□□□□ -1.86
EFCAB13-212ENST00000523842 H3BNC9 293 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 H3BUI4 141 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 SNUPNO95149 360 aaKnown RBP3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 RPLP2P05387 115 aaKnown RBP3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 PRF1P14222 555 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 IL1R2P27930 398 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 NEK2P51955 445 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 SOX8P57073 446 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 PSG6Q00889 435 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 IQCB1Q15051 598 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 TMEM240Q5SV17 173 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 TEDDM1Q5T9Z0 273 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 ZNF804AQ7Z570 1209 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 SLC15A3Q8IY34 581 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 PRSS3P2Q8NHM4 247 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 PLBD2Q8NHP8 589 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 TMEM171Q8WVE6 324 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 DAZAP1Q96EP5 407 aaKnown RBP3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 MMS19Q96T76 1030 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 NELL2Q99435 816 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 BRINP2Q9C0B6 783 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 WDCPQ9H6R7 721 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 PNPOQ9NVS9 261 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 ASIC5Q9NY37 505 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 STAP2Q9UGK3 403 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 IP6K2Q9UHH9 426 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 POLHQ9Y253 713 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 NOP58Q9Y2X3 529 aaKnown RBP3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 SPEF1Q9Y4P9 236 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 CNTNAP2Q9UHC6 1331 aa3.4□□□□□ -1.87
EFCAB13-212ENST00000523842 EIF4G1Q04637 1599 aaKnown RBP3.39□□□□□ -1.87
EFCAB13-212ENST00000523842 IL33O95760 270 aa3.39□□□□□ -1.87
EFCAB13-212ENST00000523842 ONECUT2O95948 504 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms