RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 LTB4R2Q9NPC1 389 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 SPATA6Q9NWH7 488 aaPredicted RBP18.4■□□□□ 0.54
CCNC-213ENST00000523541 THG1LQ9NWX6 298 aaKnown RBP18.4■□□□□ 0.54
CCNC-213ENST00000523541 DLGAP2Q9P1A6 1054 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 NDRG2Q9UN36 371 aaKnown RBP18.4■□□□□ 0.54
CCNC-213ENST00000523541 ATP2C2O75185 946 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 VNN1O95497 513 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 ASS1P00966 412 aaKnown RBP18.39■□□□□ 0.53
CCNC-213ENST00000523541 ANXA13P27216 316 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 AVPR1AP37288 418 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 GRIK1P39086 918 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 PDE6CP51160 858 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 CYP27A1Q02318 531 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 ZNF268Q14587 947 aaPredicted RBP18.39■□□□□ 0.53
CCNC-213ENST00000523541 TMEM150AQ86TG1 271 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 UNC93AQ86WB7 457 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 SCN4BQ8IWT1 228 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 B3GALNT2Q8NCR0 500 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 NKD2Q969F2 451 aaPredicted RBP18.39■□□□□ 0.53
CCNC-213ENST00000523541 MYLPFQ96A32 169 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 TSG101Q99816 390 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 IMPG2Q9BZV3 1241 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 DNAI2Q9GZS0 605 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 C8orf33Q9H7E9 229 aaPredicted RBP18.39■□□□□ 0.53
CCNC-213ENST00000523541 PCDHA5Q9Y5H7 936 aa18.39■□□□□ 0.53
CCNC-213ENST00000523541 ARNTLO00327 626 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 KINO60870 393 aaKnown RBP18.38■□□□□ 0.53
CCNC-213ENST00000523541 BDNFP23560 247 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 PRCPP42785 496 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 RPS9P46781 194 aaKnown RBP18.38■□□□□ 0.53
CCNC-213ENST00000523541 KPNA1P52294 538 aaPredicted RBP18.38■□□□□ 0.53
CCNC-213ENST00000523541 PSMC1P62191 440 aaKnown RBP18.38■□□□□ 0.53
CCNC-213ENST00000523541 NOP14P78316 857 aaKnown RBP18.38■□□□□ 0.53
CCNC-213ENST00000523541 FKBP3Q00688 224 aaKnown RBP18.38■□□□□ 0.53
CCNC-213ENST00000523541 LRRC63Q05C16 580 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 STIM1Q13586 685 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 C1orf220Q5T0J3 134 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 DENND5BQ6ZUT9 1274 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 C1orf210Q8IVY1 113 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 CCDC150Q8NCX0 1101 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 BPIFB1Q8TDL5 484 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 CLDN23Q96B33 292 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 FAM124BQ9H5Z6 455 aaPredicted RBP18.38■□□□□ 0.53
CCNC-213ENST00000523541 CYP3A43Q9HB55 503 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 TMEM8AQ9HCN3 771 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 MTF2Q9Y483 593 aaPredicted RBP18.38■□□□□ 0.53
CCNC-213ENST00000523541 ATP8B3O60423 1300 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 COL4A3Q01955 1670 aa18.38■□□□□ 0.53
CCNC-213ENST00000523541 MIA3Q5JRA6 1907 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 PROB1E7EW31 1015 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 LAMTOR5O43504 91 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 HCRTO43612 131 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 EPB41P11171 864 aaKnown RBP18.37■□□□□ 0.53
CCNC-213ENST00000523541 NBL1P41271 181 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 GPR15P49685 360 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 MDH1BQ5I0G3 518 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 SDHAF4Q5VUM1 108 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 FOXR2Q6PJQ5 311 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 MAMSTRQ6ZN01 415 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 CRYBG2Q8N1P7 616 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 TTC39CQ8N584 583 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 DHTKD1Q96HY7 919 aaPredicted RBP18.37■□□□□ 0.53
CCNC-213ENST00000523541 IER2Q9BTL4 223 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 TTLL2Q9BWV7 592 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 TDP1Q9NUW8 608 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 COMMD8Q9NX08 183 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 PIAS3Q9Y6X2 628 aa18.37■□□□□ 0.53
CCNC-213ENST00000523541 SLC16A3O15427 465 aaKnown RBP18.36■□□□□ 0.53
CCNC-213ENST00000523541 HLA-DRAP01903 254 aa18.36■□□□□ 0.53
CCNC-213ENST00000523541 TARSP26639 723 aaKnown RBP18.36■□□□□ 0.53
CCNC-213ENST00000523541 KRT39Q6A163 491 aa18.36■□□□□ 0.53
CCNC-213ENST00000523541 ZC3H14Q6PJT7 736 aaKnown RBP18.36■□□□□ 0.53
CCNC-213ENST00000523541 ZC3H3Q8IXZ2 948 aaKnown RBP18.36■□□□□ 0.53
CCNC-213ENST00000523541 ADSSL1Q8N142 457 aa18.36■□□□□ 0.53
CCNC-213ENST00000523541 KIAA1958Q8N8K9 716 aa18.36■□□□□ 0.53
CCNC-213ENST00000523541 MAB21L3Q8N8X9 362 aa18.36■□□□□ 0.53
CCNC-213ENST00000523541 STKLD1Q8NE28 680 aa18.36■□□□□ 0.53
CCNC-213ENST00000523541 TTC16Q8NEE8 873 aa18.36■□□□□ 0.53
CCNC-213ENST00000523541 RSPRY1Q96DX4 576 aa18.36■□□□□ 0.53
CCNC-213ENST00000523541 CHMP5Q9NZZ3 219 aa18.36■□□□□ 0.53
CCNC-213ENST00000523541 PSMA7O14818 248 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 USP17L7P0C7H9 530 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 PIK3CAP42336 1068 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 GCLMP48507 274 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 CDH8P55286 799 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 RALGPS2Q86X27 583 aaPredicted RBP18.35■□□□□ 0.53
CCNC-213ENST00000523541 SMYD4Q8IYR2 804 aaPredicted RBP18.35■□□□□ 0.53
CCNC-213ENST00000523541 TTC8Q8TAM2 541 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 FAM3CQ92520 227 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 SEMA4AQ9H3S1 761 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 SMYD3Q9H7B4 428 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 TRPM5Q9NZQ8 1165 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 NME7Q9Y5B8 376 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 R4GN57 208 aa18.35■□□□□ 0.53
CCNC-213ENST00000523541 TICRRQ7Z2Z1 1910 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 TRAV19A0A0A6YYK7 116 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 RTN3O95197 1032 aaPredicted RBP18.34■□□□□ 0.53
CCNC-213ENST00000523541 TCF3P15923 654 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 AMPD2Q01433 879 aa18.34■□□□□ 0.53
CCNC-213ENST00000523541 PPP3CAQ08209 521 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms