RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 GABRDO14764 452 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 C1QTNF9P0C862 333 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 DAB2IPQ5VWQ8 1189 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 DYMQ7RTS9 669 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 RASSF3Q86WH2 238 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 LRRC52Q8N7C0 313 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 SPATA18Q8TC71 538 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 SAAL1Q96ER3 474 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 FUBP3Q96I24 572 aaKnown RBP eCLIP24.39■■□□□ 1.49
PVT1-218ENST00000523328 TPSD1Q9BZJ3 242 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 ASCC3Q8N3C0 2202 aaKnown RBP24.39■■□□□ 1.49
PVT1-218ENST00000523328 IGF2RP11717 2491 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 BMP15O95972 392 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 OPRD1P41143 372 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 ZXDBP98169 803 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 NR1H3Q13133 447 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 GAB4Q2WGN9 574 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 USP39Q53GS9 565 aaKnown RBP24.38■■□□□ 1.49
PVT1-218ENST00000523328 UNQ6494/PRO21346Q6UXR6 183 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 C11orf74Q86VG3 221 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 SPATA2LQ8IUW3 424 aaPredicted RBP24.38■■□□□ 1.49
PVT1-218ENST00000523328 FSIP1Q8NA03 581 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 TMX3Q96JJ7 454 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 SIX4Q9UIU6 781 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 ARHGAP26Q9UNA1 814 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 SNX9Q9Y5X1 595 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 ZZEF1O43149 2961 aa24.38■■□□□ 1.49
PVT1-218ENST00000523328 ASPMQ8IZT6 3477 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 K7EQS6 105 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 CDX4O14627 284 aaPredicted RBP24.37■■□□□ 1.49
PVT1-218ENST00000523328 BCKDHBP21953 392 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 ZNF252P-AS1Q0IIN9 211 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 KCNB1Q14721 858 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 SH3PXD2AQ5TCZ1 1133 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 FAM171BQ6P995 826 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 USP49Q70CQ1 688 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 SCN4BQ8IWT1 228 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 ADGRF2Q8IZF7 708 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 CSGALNACT2Q8N6G5 542 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 TOP6BLQ8N6T0 577 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 CCDC26Q8TAB7 109 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 CACTINQ8WUQ7 758 aaKnown RBP24.37■■□□□ 1.49
PVT1-218ENST00000523328 CNOT6LQ96LI5 555 aaKnown RBP24.37■■□□□ 1.49
PVT1-218ENST00000523328 MRPL44Q9H9J2 332 aaKnown RBP24.37■■□□□ 1.49
PVT1-218ENST00000523328 SEL1LQ9UBV2 794 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 ITGA11Q9UKX5 1188 aa24.37■■□□□ 1.49
PVT1-218ENST00000523328 TNRC6BQ9UPQ9 1833 aaKnown RBP24.37■■□□□ 1.49
PVT1-218ENST00000523328 MYOFQ9NZM1 2061 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 PATE3B3GLJ2 98 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 KHNYNO15037 678 aaKnown RBP24.36■■□□□ 1.49
PVT1-218ENST00000523328 HDCP19113 662 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 PCSK1P29120 753 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 PI4KAP42356 2102 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 MAGEA11P43364 429 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 LHX1P48742 406 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 SF3A1Q15459 793 aaKnown RBP24.36■■□□□ 1.49
PVT1-218ENST00000523328 SOWAHAQ2M3V2 549 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 C2orf27AQ580R0 203 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 L1TD1Q5T7N2 865 aaKnown RBP24.36■■□□□ 1.49
PVT1-218ENST00000523328 ANO7Q6IWH7 933 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 EPSTI1Q96J88 318 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 TMEM121BQ9BXQ6 578 aaPredicted RBP24.36■■□□□ 1.49
PVT1-218ENST00000523328 TMEM9BQ9NQ34 198 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 RBAKQ9NYW8 714 aaPredicted RBP24.36■■□□□ 1.49
PVT1-218ENST00000523328 MMP17Q9ULZ9 603 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 EXOC7Q9UPT5 735 aa24.36■■□□□ 1.49
PVT1-218ENST00000523328 GON4LQ3T8J9 2241 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 TULP1O00294 542 aaPredicted RBP24.35■■□□□ 1.49
PVT1-218ENST00000523328 NFATC1O95644 943 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 LDHAP00338 332 aaKnown RBP24.35■■□□□ 1.49
PVT1-218ENST00000523328 SEC13P55735 322 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 FOXC1Q12948 553 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 RABEP1Q15276 862 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 MDGA1Q8NFP4 955 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 DNAJC19Q96DA6 116 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 ACCSQ96QU6 501 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 TBC1D7Q9P0N9 293 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 ZMIZ1Q9ULJ6 1067 aa24.35■■□□□ 1.49
PVT1-218ENST00000523328 PLXND1Q9Y4D7 1925 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 MYMKA6NI61 221 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 ATP2C2O75185 946 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 CD2BP2O95400 341 aaKnown RBP24.34■■□□□ 1.49
PVT1-218ENST00000523328 KRT19P08727 400 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 CEACAM1P13688 526 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 CSRP1P21291 193 aaKnown RBP24.34■■□□□ 1.49
PVT1-218ENST00000523328 GARTP22102 1010 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 CASP5P51878 434 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 CRY1Q16526 586 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 CYP2U1Q7Z449 544 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 LIMS2Q7Z4I7 341 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 KDF1Q8NAX2 398 aaPredicted RBP24.34■■□□□ 1.49
PVT1-218ENST00000523328 SPATA17Q96L03 361 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 MTMR12Q9C0I1 747 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 PDE11AQ9HCR9 933 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 STK17AQ9UEE5 414 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 PCNX2A6NKB5 2137 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 SPEGQ15772 3267 aa24.34■■□□□ 1.49
PVT1-218ENST00000523328 MYO18AQ92614 2054 aaKnown RBP24.33■■□□□ 1.49
PVT1-218ENST00000523328 GOLGA8IPA6NC78 632 aa24.33■■□□□ 1.49
PVT1-218ENST00000523328 GOLGA8JA6NMD2 632 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms