RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CRTAC1Q9NQ79 661 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 RXFP3Q9NSD7 469 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 INTS13Q9NVM9 706 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 GDAP2Q9NXN4 497 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 INVSQ9Y283 1065 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 MYO18AQ92614 2054 aaKnown RBP16.52■□□□□ 0.24
MRPS28-209ENST00000522987 TRDMT1O14717 391 aaKnown RBP16.52■□□□□ 0.24
MRPS28-209ENST00000522987 CLIC2O15247 247 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 USP17L7P0C7H9 530 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 PCSK1P29120 753 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 CNR2P34972 360 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 HOXD13P35453 343 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 USP46P62068 366 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 ASIC1P78348 528 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 IFRD2Q12894 506 aaPredicted RBP16.52■□□□□ 0.24
MRPS28-209ENST00000522987 ALCAMQ13740 583 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 ZNF77Q15935 545 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 CSRP2Q16527 193 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 AASDHQ4L235 1098 aaPredicted RBP16.52■□□□□ 0.24
MRPS28-209ENST00000522987 NELFCDQ8IXH7 590 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 SYNPOQ8N3V7 929 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 CPA6Q8N4T0 437 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 TOP6BLQ8N6T0 577 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 NETO1Q8TDF5 533 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 SH3RF2Q8TEC5 729 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 EZH1Q92800 747 aaPredicted RBP16.52■□□□□ 0.24
MRPS28-209ENST00000522987 P2RY13Q9BPV8 354 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 TMEM206Q9H813 350 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 ECT2Q9H8V3 914 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 ABCB6Q9NP58 842 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 HSPBP1Q9NZL4 362 aa16.52■□□□□ 0.24
MRPS28-209ENST00000522987 UXTQ9UBK9 157 aaPredicted RBP16.52■□□□□ 0.24
MRPS28-209ENST00000522987 CACNA1BQ00975 2339 aa16.52■□□□□ 0.23
MRPS28-209ENST00000522987 CNOT1A5YKK6 2376 aaKnown RBP16.51■□□□□ 0.23
MRPS28-209ENST00000522987 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 GABRDO14764 452 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 SLC30A4O14863 429 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 DCLK1O15075 740 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 DLATP10515 647 aaKnown RBP16.51■□□□□ 0.23
MRPS28-209ENST00000522987 GRIK1P39086 918 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 LHX1P48742 406 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 CYP2J2P51589 502 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 SEC13P55735 322 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 FAM160A1Q05DH4 1040 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 MYO1EQ12965 1108 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 USP4Q13107 963 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 KCNB1Q14721 858 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 PDGFRLQ15198 375 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 GAB3Q8WWW8 586 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 TRMT2BQ96GJ1 504 aaKnown RBP16.51■□□□□ 0.23
MRPS28-209ENST00000522987 MRPL45Q9BRJ2 306 aaKnown RBP16.51■□□□□ 0.23
MRPS28-209ENST00000522987 MAGEC2Q9UBF1 373 aaPredicted RBP16.51■□□□□ 0.23
MRPS28-209ENST00000522987 NME7Q9Y5B8 376 aa16.51■□□□□ 0.23
MRPS28-209ENST00000522987 STX6O43752 255 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 LRP3O75074 770 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 ABL1P00519 1130 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 HDCP19113 662 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 EML3Q32P44 896 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 MDH1BQ5I0G3 518 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 HS2ST1Q7LGA3 356 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 C12orf50Q8NA57 414 aaPredicted RBP16.5■□□□□ 0.23
MRPS28-209ENST00000522987 OSCP1Q8WVF1 389 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 CD101Q93033 1021 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 CCDC127Q96BQ5 260 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 GCNT4Q9P109 453 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 ZMYM5Q9UJ78 669 aa16.5■□□□□ 0.23
MRPS28-209ENST00000522987 CEP192Q8TEP8 1941 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 SPTLC2O15270 562 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 ATG13O75143 517 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 KRT37O76014 449 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 CLSTN1O94985 981 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 CST3P01034 146 aaPredicted RBP16.49■□□□□ 0.23
MRPS28-209ENST00000522987 TNNI1P19237 187 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 CACNA2D1P54289 1103 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 ZXDBP98169 803 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 ZNF268Q14587 947 aaPredicted RBP16.49■□□□□ 0.23
MRPS28-209ENST00000522987 E2F4Q16254 413 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 DUOXA2Q1HG44 320 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 CFAP221Q4G0U5 840 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 TCEAL6Q6IPX3 200 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 FAM171BQ6P995 826 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 C4orf50Q6ZRC1 276 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 TRAPPC11Q7Z392 1133 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 CACNA2D4Q7Z3S7 1137 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 TTC30AQ86WT1 665 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 LINC00301Q8NCQ3 95 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 TCEAL3Q969E4 200 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 MYRFLQ96LU7 910 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 TPSD1Q9BZJ3 242 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 TRIM9Q9C026 710 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 BLZF1Q9H2G9 400 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 DPEP3Q9H4B8 488 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 SMPD4Q9NXE4 827 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 CDH9Q9ULB4 789 aa16.49■□□□□ 0.23
MRPS28-209ENST00000522987 MAP1BP46821 2468 aaKnown RBP16.48■□□□□ 0.23
MRPS28-209ENST00000522987 F8VP50 259 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 CLDN5O00501 218 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 DRD1P21728 446 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 ANXA13P27216 316 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms