RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 KIF11P52732 1056 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 MAP3K7CLP57077 242 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 ADCY1Q08828 1119 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 NAA35Q5VZE5 725 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 LLGL2Q6P1M3 1020 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 ANKS3Q6ZW76 656 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-219ENST00000522387 FUKQ8N0W3 1084 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 C1orf131Q8NDD1 294 aaKnown RBP13.11□□□□□ -0.31
PABPC1-219ENST00000522387 C11orf84Q9BUA3 381 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-219ENST00000522387 B3GNT5Q9BYG0 378 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 CRISPLD1Q9H336 500 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 PRO3102Q9H379 93 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 TLR9Q9NR96 1032 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 TJP2Q9UDY2 1190 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 MYO6Q9UM54 1294 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 ADGRG1Q9Y653 693 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 PRRC2BQ5JSZ5 2229 aaKnown RBP13.1□□□□□ -0.31
PABPC1-219ENST00000522387 WDR27A2RRH5 827 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 O00370 1275 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 TEX28O15482 410 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 EFEMP2O95967 443 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 CNPP09543 421 aaKnown RBP13.1□□□□□ -0.31
PABPC1-219ENST00000522387 CCDC172P0C7W6 258 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 ABCB4P21439 1286 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 HNRNPH3P31942 346 aaKnown RBP13.1□□□□□ -0.31
PABPC1-219ENST00000522387 GPR15P49685 360 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 CDR2Q01850 454 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 PLCB3Q01970 1234 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 DSG1Q02413 1049 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 MRPL58Q14197 206 aaKnown RBP13.1□□□□□ -0.31
PABPC1-219ENST00000522387 TMCO3Q6UWJ1 677 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 PAQR9Q6ZVX9 377 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 SYN2Q92777 582 aaPredicted RBP13.1□□□□□ -0.31
PABPC1-219ENST00000522387 KRT82Q9NSB4 513 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 CDH9Q9ULB4 789 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 EFCAB8A8MWE9 144 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 ZNF263O14978 683 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 PAEPP09466 180 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 VDRP11473 427 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 BPIFB4P59827 614 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 ROR1Q01973 937 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 DUSP4Q13115 394 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 RAB30Q15771 203 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 DDR2Q16832 855 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 SPATA2LQ8IUW3 424 aaPredicted RBP13.1□□□□□ -0.31
PABPC1-219ENST00000522387 SCN4BQ8IWT1 228 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 LRCH3Q96II8 777 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 FAXDC2Q96IV6 333 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 SEPT5Q99719 369 aaPredicted RBP13.1□□□□□ -0.31
PABPC1-219ENST00000522387 PACSIN1Q9BY11 444 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 ZBP1Q9H171 429 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 CYTH4Q9UIA0 394 aa13.1□□□□□ -0.31
PABPC1-219ENST00000522387 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.1□□□□□ -0.31
PABPC1-219ENST00000522387 TRIOO75962 3097 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 ATMINO43313 823 aaPredicted RBP13.09□□□□□ -0.31
PABPC1-219ENST00000522387 ZRANB2O95218 330 aaKnown RBP eCLIP13.09□□□□□ -0.31
PABPC1-219ENST00000522387 CCDC175P0C221 793 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 CASQ1P31415 396 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 PRKCIP41743 596 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 PLA2G4AP47712 749 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 ERVK-21P61565 698 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 FAM193AP78312 1265 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 MGAT5BQ3V5L5 792 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 TMTC1Q8IUR5 882 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 PIK3R5Q8WYR1 880 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
PABPC1-219ENST00000522387 TRIM10Q9UDY6 481 aa13.09□□□□□ -0.31
PABPC1-219ENST00000522387 GOLGA6L9A6NEM1 432 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.31
PABPC1-219ENST00000522387 AP1G2O75843 785 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 NDUFA10O95299 355 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 CTSAP10619 480 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 GRIK1P39086 918 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 PDE4CQ08493 712 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 CCDC122Q5T0U0 273 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 CYP4A22Q5TCH4 519 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 OLIG1Q8TAK6 271 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 ZCWPW1Q9H0M4 648 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 ZNF576Q9H609 170 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 MTRRQ9UBK8 725 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 HESX1Q9UBX0 185 aa13.08□□□□□ -0.31
PABPC1-219ENST00000522387 EPN1Q9Y6I3 576 aaPredicted RBP13.08□□□□□ -0.31
PABPC1-219ENST00000522387 CCDC66A2RUB6 948 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 F8VP50 259 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 H3BNC9 293 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 KLRC2P26717 231 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 PMF1Q6P1K2 205 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
PABPC1-219ENST00000522387 FAM171BQ6P995 826 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 ADGRD2Q7Z7M1 963 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 VPS36Q86VN1 386 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 TTC39CQ8N584 583 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms