RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TTC30AQ86WT1 665 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 DCP1BQ8IZD4 617 aaKnown RBP13.82□□□□□ -0.2
CPNE3-205ENST00000522240 FUKQ8N0W3 1084 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 ANKRD52Q8NB46 1076 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 STK32AQ8WU08 396 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 RFFLQ8WZ73 363 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 MYLPFQ96A32 169 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 PLVAPQ9BX97 442 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 PACSIN1Q9BY11 444 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 CYLDQ9NQC7 956 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 AVENQ9NQS1 362 aaPredicted RBP13.82□□□□□ -0.2
CPNE3-205ENST00000522240 MTMR10Q9NXD2 777 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 TRMT1Q9NXH9 659 aaKnown RBP13.82□□□□□ -0.2
CPNE3-205ENST00000522240 MTRRQ9UBK8 725 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 BACE2Q9Y5Z0 518 aa13.82□□□□□ -0.2
CPNE3-205ENST00000522240 PATJQ8NI35 1801 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 GBF1Q92538 1859 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 MYBPHLA2RUH7 354 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 TMCO5BA8MYB1 307 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 ATP2C2O75185 946 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 FAM200BP0CF97 657 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 NPR3P17342 541 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 GLUD2P49448 558 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 SLC8A3P57103 927 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 DSG1Q02413 1049 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 PTP4A2Q12974 167 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 PDCLQ13371 301 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 TCEAL1Q15170 157 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 SHHQ15465 462 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 NFE2Q16621 373 aaPredicted RBP13.81□□□□□ -0.2
CPNE3-205ENST00000522240 FAM109BQ6ICB4 259 aaPredicted RBP13.81□□□□□ -0.2
CPNE3-205ENST00000522240 CEP57Q86XR8 500 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 RHOT2Q8IXI1 618 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 MCOLN2Q8IZK6 566 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 C17orf53Q8N3J3 647 aaPredicted RBP13.81□□□□□ -0.2
CPNE3-205ENST00000522240 ZNF653Q96CK0 615 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 SMARCD1Q96GM5 515 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 PCED1BQ96HM7 432 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 FUBP3Q96I24 572 aaKnown RBP eCLIP13.81□□□□□ -0.2
CPNE3-205ENST00000522240 CALR3Q96L12 384 aaKnown RBP13.81□□□□□ -0.2
CPNE3-205ENST00000522240 SAMD11Q96NU1 681 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 B3GNT5Q9BYG0 378 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 LACRTQ9GZZ8 138 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 MIS12Q9H081 205 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 STRIP2Q9ULQ0 834 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 LZTS1Q9Y250 596 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 PCDHA11Q9Y5I1 949 aa13.81□□□□□ -0.2
CPNE3-205ENST00000522240 LCHNA4D1U4 455 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 LINC01553A4QN01 128 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 C5orf67F2Z3F1 127 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 XPO1O14980 1071 aaKnown RBP13.8□□□□□ -0.2
CPNE3-205ENST00000522240 FGF18O76093 207 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 CYP1A2P05177 515 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 URODP06132 367 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 ADORA2BP29275 332 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 SSTR3P32745 418 aaPredicted RBP13.8□□□□□ -0.2
CPNE3-205ENST00000522240 CTNNB1P35222 781 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 BMPR1AP36894 532 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 PLA2G4AP47712 749 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 HADHBP55084 474 aaKnown RBP13.8□□□□□ -0.2
CPNE3-205ENST00000522240 SNX16P57768 344 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 GPC5P78333 572 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 CREMQ03060 361 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 KRT17Q04695 432 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 PSMD5Q16401 504 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 CCDC142Q17RM4 750 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 CFAP221Q4G0U5 840 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 PTPN20Q4JDL3 420 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 LIN9Q5TKA1 542 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 SLC8B1Q6J4K2 584 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 PAQR9Q6ZVX9 377 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 ERICH1Q86X53 443 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 WDTC1Q8N5D0 677 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 IPO4Q8TEX9 1081 aaKnown RBP13.8□□□□□ -0.2
CPNE3-205ENST00000522240 C2orf15Q8WU43 125 aaKnown RBP13.8□□□□□ -0.2
CPNE3-205ENST00000522240 SLC35F5Q8WV83 523 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 CPA5Q8WXQ8 436 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 SECISBP2LQ93073 1101 aaKnown RBP13.8□□□□□ -0.2
CPNE3-205ENST00000522240 TMEM209Q96SK2 561 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 LPIN3Q9BQK8 851 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 C11orf70Q9BRQ4 267 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 MED10Q9BTT4 135 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 DUSP16Q9BY84 665 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 THAP2Q9H0W7 228 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 ABCB6Q9NP58 842 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 PNPLA8Q9NP80 782 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 LZTFL1Q9NQ48 299 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 KRT82Q9NSB4 513 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 ADAM22Q9P0K1 906 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 MYO1AQ9UBC5 1043 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 CYTH4Q9UIA0 394 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 SSX2IPQ9Y2D8 614 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 PLXNA4Q9HCM2 1894 aa13.8□□□□□ -0.2
CPNE3-205ENST00000522240 A0A0U1RQJ8 604 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 MTA2O94776 668 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 RB1P06400 928 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 ABCB4P21439 1286 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 ACADSBP45954 432 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms