RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
USP42-207ENST00000521713 ACKR2O00590 384 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 IMPG1Q17R60 797 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 PAN2Q504Q3 1202 aaKnown RBP16.85■□□□□ 0.29
USP42-207ENST00000521713 ACOT1Q86TX2 421 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 PGBD3Q8N328 593 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 CCNYL1Q8N7R7 359 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 FBXO32Q969P5 355 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 CPB2Q96IY4 423 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 AGAP3Q96P47 875 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 RIC1Q4ADV7 1423 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 CARNS1A5YM72 827 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 TRPC1P48995 793 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 SUGP1Q8IWZ8 645 aaKnown RBP16.85■□□□□ 0.29
USP42-207ENST00000521713 SNX19Q92543 992 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 ENTPD7Q9NQZ7 604 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 TRPM5Q9NZQ8 1165 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 EPC2Q52LR7 807 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 SLC44A4Q53GD3 710 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 NT5DC4Q86YG4 428 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 SPATA18Q8TC71 538 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 MRPL9Q9BYD2 267 aaKnown RBP16.85■□□□□ 0.29
USP42-207ENST00000521713 GTSE1Q9NYZ3 720 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 MED1Q15648 1581 aaPredicted RBP16.84■□□□□ 0.29
USP42-207ENST00000521713 hCG_2014768A0A024R1R8 64 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 GTPBP10A4D1E9 387 aaKnown RBP16.84■□□□□ 0.29
USP42-207ENST00000521713 FOXN3O00409 490 aaPredicted RBP16.84■□□□□ 0.29
USP42-207ENST00000521713 ADCY3O60266 1144 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 CST8O60676 142 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 WDCPQ9H6R7 721 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 SEPT3Q9UH03 358 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 PQBP1O60828 265 aaKnown RBP16.84■□□□□ 0.29
USP42-207ENST00000521713 RBP3P10745 1247 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 EPHB2P29323 1055 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 CASP4P49662 377 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 SP3Q02447 781 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 EFTUD2Q15029 972 aaKnown RBP eCLIP16.84■□□□□ 0.29
USP42-207ENST00000521713 ADRM1Q16186 407 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 KIF19Q2TAC6 998 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 LZICQ8WZA0 190 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 TMEM39AQ9NV64 488 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 PKD2L2Q9NZM6 624 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 SERPINB3P29508 390 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 NCAPHQ15003 741 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 CMTM5Q96DZ9 223 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 ZIM3Q96PE6 472 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 ISCUQ9H1K1 167 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 MLXIPLQ9NP71 852 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 CYP39A1Q9NYL5 469 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 CYTH3O43739 400 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 ASMTLO95671 621 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 IL10P22301 178 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 ADCYAP1R1P41586 468 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 HSPA13P48723 471 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 LRRC8BQ6P9F7 803 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 TEKT4Q8WW24 435 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 TRABDQ9H4I3 376 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 MTO1Q9Y2Z2 717 aaKnown RBP16.84■□□□□ 0.29
USP42-207ENST00000521713 TRPV2Q9Y5S1 764 aa16.84■□□□□ 0.29
USP42-207ENST00000521713 C16orf96A6NNT2 1141 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 PHF20L1A8MW92 1017 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 M0QYT0 321 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 GZMAP12544 262 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 IFNA8P32881 189 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 CENPCQ03188 943 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 GJB7Q6PEY0 223 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 TMC7Q7Z402 723 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 OR9Q1Q8NGQ5 310 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 USP33Q8TEY7 942 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 MAML3Q96JK9 1138 aa16.83■□□□□ 0.29
USP42-207ENST00000521713 L3MBTL3Q96JM7 780 aaPredicted RBP16.83■□□□□ 0.29
USP42-207ENST00000521713 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.83■□□□□ 0.28
USP42-207ENST00000521713 WTIPA6NIX2 430 aaPredicted RBP16.83■□□□□ 0.28
USP42-207ENST00000521713 CFAP99D6REC4 459 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 ZNF177Q13360 481 aaPredicted RBP16.83■□□□□ 0.28
USP42-207ENST00000521713 AMHR2Q16671 573 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 RAD9BQ6WBX8 426 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 ZNF507Q8TCN5 953 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 TRPM4Q8TD43 1214 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 UCMAQ8WVF2 138 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 FRMD8Q9BZ67 464 aaPredicted RBP16.83■□□□□ 0.28
USP42-207ENST00000521713 H0Y626 953 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 PIK3CDO00329 1044 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 TRIM16O95361 564 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 LSM8O95777 96 aaKnown RBP16.83■□□□□ 0.28
USP42-207ENST00000521713 KRT8P05787 483 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 ATXN8OSP0DMR3 200 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 PSMC6P62333 389 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 CDH18Q13634 790 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 THEMIS2Q5TEJ8 643 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 SV2AQ7L0J3 742 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 DEFB128Q7Z7B8 93 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 CALML6Q8TD86 181 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 USP13Q92995 863 aaPredicted RBP16.83■□□□□ 0.28
USP42-207ENST00000521713 TSPAN17Q96FV3 270 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 SEMA6BQ9H3T3 888 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 FRMPD4Q14CM0 1322 aa16.83■□□□□ 0.28
USP42-207ENST00000521713 FAM47DPA6NHR8 397 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 MRPS15P82914 257 aaKnown RBP16.82■□□□□ 0.28
USP42-207ENST00000521713 GLTPD2A6NH11 291 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms