RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ZNF677Q86XU0 584 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 KBTBD2Q8IY47 623 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 NME8Q8N427 588 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 GMCL1P1Q8NEA9 526 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 GSTCDQ8NEC7 633 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 OPTNQ96CV9 577 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 ACSS3Q9H6R3 686 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 CLIC5Q9NZA1 410 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 GABBR1Q9UBS5 961 aa13.41□□□□□ -0.26
TRAPPC9-208ENST00000520857 UMODL1Q5DID0 1318 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 DDX60LQ5H9U9 1706 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 A8MXQ7 604 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 NFIBO00712 420 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 VIL1P09327 827 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 BST1Q10588 318 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 MROH9Q5TGP6 573 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 OLFML2BQ68BL8 750 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 SCYL2Q6P3W7 929 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 MON1BQ7L1V2 547 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 ULK2Q8IYT8 1036 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 TMEM35BQ8NCS4 154 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 FBXO27Q8NI29 283 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 OLFM3Q96PB7 478 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 RHBDL2Q9NX52 303 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 RBAKQ9NYW8 714 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 ASB3Q9Y575 518 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 CLUHO75153 1309 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 TRPA1O75762 1119 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 PGM3O95394 542 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 ADRA2BP18089 450 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 GDF10P55107 478 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 JAG1P78504 1218 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 USP4Q13107 963 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 TRPC3Q13507 836 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 DNAL1Q4LDG9 190 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 RSPH3Q86UC2 560 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 SPATA24Q86W54 205 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 TMEM161BQ8NDZ6 487 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 USP6NLQ92738 828 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 APOPT1Q96IL0 206 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 SERAC1Q96JX3 654 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 RAB6BQ9NRW1 208 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 KRT82Q9NSB4 513 aa13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 NXF1Q9UBU9 619 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-208ENST00000520857 ECE2O60344 883 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 AVILO75366 819 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 RPL22P35268 128 aaKnown RBP13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 UBAP2LQ14157 1087 aaKnown RBP13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 TRIM42Q8IWZ5 723 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 NDUFAF2Q8N183 169 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 EMC1Q8N766 993 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 SPATA18Q8TC71 538 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 FAM192AQ9GZU8 254 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 KANSL3Q9P2N6 904 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 TAGLN3Q9UI15 199 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 AGO2Q9UKV8 859 aaKnown RBP13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 HEY1Q9Y5J3 304 aa13.4□□□□□ -0.27
TRAPPC9-208ENST00000520857 PRR5-ARHGAP8B1AHC4 643 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 WDR64B1ANS9 1081 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 CYB561D2O14569 222 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 CALB1P05937 261 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 KRT19P08727 400 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 RARBP10826 455 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 ATP6V1B1P15313 513 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 COG7P83436 770 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 ARHGAP8P85298 464 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 CDO1Q16878 200 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 CNPY1Q3B7I2 92 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 TKFCQ3LXA3 575 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 WDR72Q3MJ13 1102 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 LPCAT4Q643R3 524 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 C1orf228Q6PIY5 440 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 WDR75Q8IWA0 830 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 C12orf56Q8IXR9 622 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 BANPQ8N9N5 519 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 DEPTORQ8TB45 409 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 CPT1BQ92523 772 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 FAM136AQ96C01 138 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 MSTO1Q9BUK6 570 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 DMAP1Q9NPF5 467 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 EURLQ9NYK6 297 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 SLC4A7Q9Y6M7 1214 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 SPATA31A5Q5VU36 1347 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 SPATA31A7Q8IWB4 1347 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 TCRBV7S3A2A0A539 114 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 BTKQ06187 659 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 ARHGEF16Q5VV41 709 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 GPAT2Q6NUI2 795 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZBTB33Q86T24 672 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZNF606Q8WXB4 792 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 PPP2R3CQ969Q6 453 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 RAVER2Q9HCJ3 691 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 PPM1HQ9ULR3 514 aa13.39□□□□□ -0.27
TRAPPC9-208ENST00000520857 E2F8A0AVK6 867 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 SMAPO00193 183 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 APRTP07741 180 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 CCNFP41002 786 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms