RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 CFAP45Q9UL16 551 aa8.65□□□□□ -1.02
CSMD1-209ENST00000520630 HCN2Q9UL51 889 aa8.65□□□□□ -1.02
CSMD1-209ENST00000520630 SLC6A14Q9UN76 642 aa8.65□□□□□ -1.02
CSMD1-209ENST00000520630 PCDHB6Q9Y5E3 794 aa8.65□□□□□ -1.02
CSMD1-209ENST00000520630 WNT6Q9Y6F9 365 aa8.65□□□□□ -1.02
CSMD1-209ENST00000520630 COL27A1Q8IZC6 1860 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-209ENST00000520630 TEX15Q9BXT5 2789 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 OR6C75A6NL08 312 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 OPHN1O60890 802 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 FGF19O95750 216 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 CFIP05156 583 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 PTMSP20962 102 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 ITPKBP27987 946 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 CDC25CP30307 473 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 TXKP42681 527 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 SLC6A11P48066 632 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 TRAPPC10P48553 1259 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 USP4Q13107 963 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 ZNF268Q14587 947 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-209ENST00000520630 MTF1Q14872 753 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 SLC39A14Q15043 492 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 DUOXA1Q1HG43 343 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 ZNF568Q3ZCX4 644 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 OVOS1Q6IE37 1185 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 LPCAT2Q7L5N7 544 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 TMPRSS7Q7RTY8 843 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 GLRX5Q86SX6 157 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 MON1AQ86VX9 555 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 ALLCQ8N6M5 410 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 C4orf32Q8N8J7 132 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 BAHD1Q8TBE0 780 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-209ENST00000520630 GPT2Q8TD30 523 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 OSCP1Q8WVF1 389 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 UBL7Q96S82 380 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-209ENST00000520630 ZCWPW1Q9H0M4 648 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 PRORYQ9H606 182 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 POLMQ9NP87 494 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-209ENST00000520630 CD93Q9NPY3 652 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 TOPORSQ9NS56 1045 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-209ENST00000520630 TMLHEQ9NVH6 421 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 ARHGAP28Q9P2N2 729 aa8.64□□□□□ -1.03
CSMD1-209ENST00000520630 NOL7Q9UMY1 257 aaKnown RBP8.64□□□□□ -1.03
CSMD1-209ENST00000520630 MORC2Q9Y6X9 1032 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-209ENST00000520630 UBR5O95071 2799 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 FLNCQ14315 2725 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 TTC26A0AVF1 554 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 TRABD2BA6NFA1 517 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 EIF4E1BA6NMX2 242 aaKnown RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 K7ERI5 159 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 TK2O00142 265 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 SPTLC2O15270 562 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 FAM189A1O60320 539 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 MARCH6O60337 910 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 CXCL8P10145 99 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 MCF2P10911 925 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 HAPLN1P10915 354 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 TYMPP19971 482 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 MARCKSP29966 332 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 TNFSF9P41273 254 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 KIR2DL1P43626 348 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 NPTX2P47972 431 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 EFNA5P52803 228 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 YARSP54577 528 aaKnown RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 LILRA4P59901 499 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 MAPK7Q13164 816 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 DMP1Q13316 513 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 PDGFRLQ15198 375 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 STK38Q15208 465 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 CALCRLQ16602 461 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 SLC39A12Q504Y0 691 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 SPDYCQ5MJ68 293 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 TTC38Q5R3I4 469 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 SDHAF4Q5VUM1 108 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 LYSMD4Q5XG99 296 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 ITIH5Q86UX2 942 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 C12orf40Q86WS4 652 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 NAXDQ8IW45 347 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 SCUBE3Q8IX30 993 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 EFCAB13Q8IY85 973 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 PHTF2Q8N3S3 785 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 HDDC3Q8N4P3 179 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 TXNDC5Q8NBS9 432 aaKnown RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 SEPT5Q99719 369 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 TMEM134Q9H6X4 195 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 KIF9Q9HAQ2 790 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 CD248Q9HCU0 757 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 TUFT1Q9NNX1 390 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 DUS2Q9NX74 493 aaKnown RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 GCNT4Q9P109 453 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 KIAA1522Q9P206 1035 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-209ENST00000520630 PCOLCE2Q9UKZ9 415 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 PCDHA7Q9UN72 937 aa8.63□□□□□ -1.03
CSMD1-209ENST00000520630 PHLPP2Q6ZVD8 1323 aa8.62□□□□□ -1.03
CSMD1-209ENST00000520630 A0A0A0MRY4 1105 aa8.62□□□□□ -1.03
CSMD1-209ENST00000520630 TRAK2O60296 914 aa8.62□□□□□ -1.03
CSMD1-209ENST00000520630 PPP6R2O75170 966 aa8.62□□□□□ -1.03
CSMD1-209ENST00000520630 KLF8O95600 359 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-209ENST00000520630 CYP11A1P05108 521 aa8.62□□□□□ -1.03
CSMD1-209ENST00000520630 ATXN1LP0C7T5 689 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms