RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 WARSP23381 471 aaKnown RBP16.23■□□□□ 0.19
CSMD1-207ENST00000520451 HOXA6P31267 233 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 CYP2J2P51589 502 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 AMPD2Q01433 879 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 FAM160A1Q05DH4 1040 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 MAPRE1Q15691 268 aaKnown RBP16.23■□□□□ 0.19
CSMD1-207ENST00000520451 PKN3Q6P5Z2 889 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 CEP68Q76N32 757 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 TRAPPC11Q7Z392 1133 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 NELFCDQ8IXH7 590 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 FSIP1Q8NA03 581 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 ZNF507Q8TCN5 953 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 CHFRQ96EP1 664 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 FNBP1Q96RU3 617 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 SLC22A12Q96S37 553 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 CYP2S1Q96SQ9 504 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 C7orf25Q9BPX7 421 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 CRTAC1Q9NQ79 661 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 UBE4BO95155 1302 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 C2orf78A6NCI8 922 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 CLIC2O15247 247 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 POLR2DO15514 142 aaKnown RBP16.22■□□□□ 0.19
CSMD1-207ENST00000520451 TGFB1I1O43294 461 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 TNNI1P19237 187 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 BDNFP23560 247 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 GRIK1P39086 918 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 IFNAR2P48551 515 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 ATXN1P54253 815 aaKnown RBP16.22■□□□□ 0.19
CSMD1-207ENST00000520451 CYP27A1Q02318 531 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 USP4Q13107 963 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 KCNB1Q14721 858 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 ZNF77Q15935 545 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 VSTM1Q6UX27 236 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 UNC13DQ70J99 1090 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 WDR5BQ86VZ2 330 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 CPA6Q8N4T0 437 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 ARL14EPQ8N8R7 260 aaPredicted RBP16.22■□□□□ 0.19
CSMD1-207ENST00000520451 CCDC127Q96BQ5 260 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 CGRRF1Q99675 332 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 MAGEF1Q9HAY2 307 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 DUS2Q9NX74 493 aaKnown RBP16.22■□□□□ 0.19
CSMD1-207ENST00000520451 WNT6Q9Y6F9 365 aa16.22■□□□□ 0.19
CSMD1-207ENST00000520451 ZNF638Q14966 1978 aaKnown RBP16.22■□□□□ 0.19
CSMD1-207ENST00000520451 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.21■□□□□ 0.19
CSMD1-207ENST00000520451 LRP3O75074 770 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 ATG13O75143 517 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 EGFP01133 1207 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 ANXA13P27216 316 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 CASP1P29466 404 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 PXNP49023 591 aaPredicted RBP16.21■□□□□ 0.19
CSMD1-207ENST00000520451 CYP24A1Q07973 514 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 PSMD6Q15008 389 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 NAIF1Q69YI7 327 aaPredicted RBP16.21■□□□□ 0.19
CSMD1-207ENST00000520451 HS2ST1Q7LGA3 356 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 XXYLT1Q8NBI6 393 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 OSCP1Q8WVF1 389 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 SCFD1Q8WVM8 642 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 ATP2A3Q93084 1043 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 EXOC4Q96A65 974 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 SPATA17Q96L03 361 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 P2RY13Q9BPV8 354 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 MRPL45Q9BRJ2 306 aaKnown RBP16.21■□□□□ 0.19
CSMD1-207ENST00000520451 BLZF1Q9H2G9 400 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 SNX25Q9H3E2 840 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 ECT2Q9H8V3 914 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 FBRSL1Q9HCM7 1045 aaKnown RBP16.21■□□□□ 0.19
CSMD1-207ENST00000520451 SEMA4GQ9NTN9 838 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 GCNT4Q9P109 453 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 SLC8A2Q9UPR5 921 aa16.21■□□□□ 0.19
CSMD1-207ENST00000520451 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.21■□□□□ 0.19
CSMD1-207ENST00000520451 RNF40O75150 1001 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 CST3P01034 146 aaPredicted RBP16.2■□□□□ 0.18
CSMD1-207ENST00000520451 ZSCAN22P10073 491 aaPredicted RBP16.2■□□□□ 0.18
CSMD1-207ENST00000520451 DRD1P21728 446 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 GJA4P35212 333 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 GNL1P36915 607 aaPredicted RBP16.2■□□□□ 0.18
CSMD1-207ENST00000520451 ME1P48163 572 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 GALK1P51570 392 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 SNRPFP62306 86 aaKnown RBP16.2■□□□□ 0.18
CSMD1-207ENST00000520451 TNNC1P63316 161 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 EHHADHQ08426 723 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 MDH1BQ5I0G3 518 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 DENND5BQ6ZUT9 1274 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 FAM160A2Q8N612 972 aaPredicted RBP16.2■□□□□ 0.18
CSMD1-207ENST00000520451 OR6B3Q8NGW1 331 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 MYCBPAPQ8TBZ2 947 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 SH3RF2Q8TEC5 729 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 SNX21Q969T3 373 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 PCED1BQ96HM7 432 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 CEP295NLQ96MC4 621 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 SLC39A2Q9NP94 309 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 FAM13BQ9NYF5 915 aa16.2■□□□□ 0.18
CSMD1-207ENST00000520451 TRIM66O15016 1216 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 TACC1O75410 805 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 F13A1P00488 732 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
CSMD1-207ENST00000520451 HDCP19113 662 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 AFMP43652 599 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 PDE6CP51160 858 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 USP46P62068 366 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms