RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 ABHD16BQ9H3Z7 469 aa27.05■■□□□ 1.92
COL13A1-213ENST00000520267 C10orf88Q9H8K7 445 aa27.05■■□□□ 1.92
COL13A1-213ENST00000520267 PDE4CQ08493 712 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 NT5DC4Q86YG4 428 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 ACTL9Q8TC94 416 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 SEC16BQ96JE7 1060 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 FAM49AQ9H0Q0 323 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-213ENST00000520267 ADAMTS10Q9H324 1103 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 SAYSD1Q9NPB0 183 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 TSPAN16Q9UKR8 245 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 KIAA0754O94854 1291 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 PECAM1P16284 738 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-213ENST00000520267 HOXA11P31270 313 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-213ENST00000520267 MYO1EQ12965 1108 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 IFT88Q13099 833 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 CYP4F22Q6NT55 531 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 BBS12Q6ZW61 710 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 CYP4X1Q8N118 509 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 C12orf29Q8N999 325 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 CDHR5Q9HBB8 845 aa27.04■■□□□ 1.92
COL13A1-213ENST00000520267 IFNB1P01574 187 aa27.03■■□□□ 1.92
COL13A1-213ENST00000520267 TRNP1Q6NT89 227 aa27.03■■□□□ 1.92
COL13A1-213ENST00000520267 LCLAT1Q6UWP7 414 aa27.03■■□□□ 1.92
COL13A1-213ENST00000520267 PLEKHH3Q7Z736 793 aa27.03■■□□□ 1.92
COL13A1-213ENST00000520267 ZMAT2Q96NC0 199 aaKnown RBP27.03■■□□□ 1.92
COL13A1-213ENST00000520267 NT5C1AQ9BXI3 368 aa27.03■■□□□ 1.92
COL13A1-213ENST00000520267 PCDH9Q9HC56 1237 aa27.03■■□□□ 1.92
COL13A1-213ENST00000520267 SNTG2Q9NY99 539 aa27.03■■□□□ 1.92
COL13A1-213ENST00000520267 TRUB2O95900 331 aaKnown RBP27.02■■□□□ 1.92
COL13A1-213ENST00000520267 PFKMP08237 780 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 LIG3P49916 1009 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 RNASEH2BQ5TBB1 312 aaKnown RBP27.02■■□□□ 1.92
COL13A1-213ENST00000520267 IQSEC1Q6DN90 963 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 TADA2BQ86TJ2 420 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 OTUD6BQ8N6M0 293 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 HSPH1Q92598 858 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 PTPN18Q99952 460 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 PPEF2O14830 753 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 RNF8O76064 485 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 DCAF4L1Q3SXM0 396 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 SH3PXD2AQ5TCZ1 1133 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 VSTM1Q6UX27 236 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 KCTD6Q8NC69 237 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 CMASQ8NFW8 434 aaPredicted RBP27.02■■□□□ 1.92
COL13A1-213ENST00000520267 PIWIL1Q96J94 861 aaKnown RBP27.02■■□□□ 1.92
COL13A1-213ENST00000520267 PEBP4Q96S96 227 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 EIF2AQ9BY44 585 aaKnown RBP27.02■■□□□ 1.92
COL13A1-213ENST00000520267 USP18Q9UMW8 372 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 RALGAPA2Q2PPJ7 1873 aa27.02■■□□□ 1.92
COL13A1-213ENST00000520267 E5RJQ4 531 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 ECM2O94769 699 aaPredicted RBP27.01■■□□□ 1.91
COL13A1-213ENST00000520267 ATP5DP30049 168 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 GDF10P55107 478 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 MORF4L2Q15014 288 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 RAB6CQ53S08 254 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 CEP128Q6ZU80 1094 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 FAM183BPQ6ZVS7 135 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 YTHDF3Q7Z739 585 aaKnown RBP27.01■■□□□ 1.91
COL13A1-213ENST00000520267 RAB6CQ9H0N0 254 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 ASNSD1Q9NWL6 643 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 TBK1Q9UHD2 729 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 FASTKD3Q14CZ7 662 aaKnown RBP27.01■■□□□ 1.91
COL13A1-213ENST00000520267 ACAP1Q15027 740 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 HP1BP3Q5SSJ5 553 aaPredicted RBP27.01■■□□□ 1.91
COL13A1-213ENST00000520267 OR6B2Q6IFH4 312 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 MRPL45Q9BRJ2 306 aaKnown RBP27.01■■□□□ 1.91
COL13A1-213ENST00000520267 CCDC134Q9H6E4 229 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 LGALS13Q9UHV8 139 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 NAALADL1Q9UQQ1 740 aa27.01■■□□□ 1.91
COL13A1-213ENST00000520267 GPR32O75388 356 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 IFNAR2P48551 515 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 ZNF143P52747 638 aaPredicted RBP27■■□□□ 1.91
COL13A1-213ENST00000520267 STAT4Q14765 748 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 GOLGA7BQ2TAP0 167 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 PRAMEF19Q5SWL8 479 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 RFX6Q8HWS3 928 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 TTC13Q8NBP0 860 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 PPM1EQ8WY54 764 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 KIAA1257Q9ULG3 409 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 HES2Q9Y543 173 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 DYNC1LI1Q9Y6G9 523 aaKnown RBP27■■□□□ 1.91
COL13A1-213ENST00000520267 TMEM120BA0PK00 339 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 RRN3P2A6NIE6 340 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 DYNC1LI2O43237 492 aaPredicted RBP27■■□□□ 1.91
COL13A1-213ENST00000520267 ABHD2P08910 425 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 GPD1P21695 349 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 CCDC142Q17RM4 750 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 RNF187Q5TA31 235 aaPredicted RBP27■■□□□ 1.91
COL13A1-213ENST00000520267 GKAP1Q5VSY0 366 aaPredicted RBP27■■□□□ 1.91
COL13A1-213ENST00000520267 CATSPER4Q7RTX7 472 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 LRRC34Q8IZ02 419 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 CACNA2D3Q8IZS8 1091 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 RXFP2Q8WXD0 754 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 TUBGCP4Q9UGJ1 667 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 NME7Q9Y5B8 376 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 SNX9Q9Y5X1 595 aa27■■□□□ 1.91
COL13A1-213ENST00000520267 RGS7P49802 495 aa26.99■■□□□ 1.91
COL13A1-213ENST00000520267 FAM110CQ1W6H9 321 aa26.99■■□□□ 1.91
COL13A1-213ENST00000520267 PPP1R26Q5T8A7 1209 aaPredicted RBP26.99■■□□□ 1.91
COL13A1-213ENST00000520267 SLC27A1Q6PCB7 646 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms