RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PER2O15055 1255 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 SEC24AO95486 1093 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 PLEKP08567 350 aaPredicted RBP18.84■□□□□ 0.61
SDC2-205ENST00000520233 SETSIPP0DME0 302 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 TNFAIP3P21580 790 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 ANXA13P27216 316 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 SSTR3P32745 418 aaPredicted RBP18.84■□□□□ 0.61
SDC2-205ENST00000520233 NRIP1P48552 1158 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 TUFMP49411 452 aaKnown RBP18.84■□□□□ 0.61
SDC2-205ENST00000520233 SLC8A3P57103 927 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 BST2Q10589 180 aaKnown RBP18.84■□□□□ 0.61
SDC2-205ENST00000520233 MAPK8IP2Q13387 824 aaPredicted RBP18.84■□□□□ 0.61
SDC2-205ENST00000520233 DENND1BQ6P3S1 775 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 TRIM72Q6ZMU5 477 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 VPS36Q86VN1 386 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 KREMEN2Q8NCW0 462 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 OLIG1Q8TAK6 271 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 HDAC7Q8WUI4 952 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 CHP1Q99653 195 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 SMOQ99835 787 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 CRISPLD1Q9H336 500 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 CYP4F11Q9HBI6 524 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 DMAP1Q9NPF5 467 aaPredicted RBP18.84■□□□□ 0.61
SDC2-205ENST00000520233 SLC27A5Q9Y2P5 690 aa18.84■□□□□ 0.61
SDC2-205ENST00000520233 LSM8O95777 96 aaKnown RBP18.83■□□□□ 0.6
SDC2-205ENST00000520233 CYP1A1P04798 512 aaPredicted RBP18.83■□□□□ 0.6
SDC2-205ENST00000520233 NPR3P17342 541 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 CDH5P33151 784 aaPredicted RBP18.83■□□□□ 0.6
SDC2-205ENST00000520233 EIF4A3P38919 411 aaKnown RBP18.83■□□□□ 0.6
SDC2-205ENST00000520233 GRIK1P39086 918 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 GPD2P43304 727 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 RPL10AP62906 217 aaKnown RBP18.83■□□□□ 0.6
SDC2-205ENST00000520233 ADGRE1Q14246 886 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 MGAT5BQ3V5L5 792 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 CYP26C1Q6V0L0 522 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 CLEC20AQ6ZU45 233 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 CCDC149Q6ZUS6 474 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 RTL10Q7L3V2 364 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 TTC9BQ8N6N2 239 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 UBA3Q8TBC4 463 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 SECISBP2LQ93073 1101 aaKnown RBP18.83■□□□□ 0.6
SDC2-205ENST00000520233 C8orf48Q96LL4 319 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 FAM161BQ96MY7 647 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 PCDHB18PQ96TA0 734 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 GAS2L1Q99501 681 aaPredicted RBP18.83■□□□□ 0.6
SDC2-205ENST00000520233 SEPT5Q99719 369 aaPredicted RBP18.83■□□□□ 0.6
SDC2-205ENST00000520233 UBXN6Q9BZV1 441 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 PLEKHA4Q9H4M7 779 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 DPP7Q9UHL4 492 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 CEP83Q9Y592 693 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 MTCH2Q9Y6C9 303 aa18.83■□□□□ 0.6
SDC2-205ENST00000520233 ATG2AQ2TAZ0 1938 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 PRRG1O14668 218 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 XPO1O14980 1071 aaKnown RBP18.82■□□□□ 0.6
SDC2-205ENST00000520233 TRIM66O15016 1216 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 BEST1O76090 585 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 SPATA31D3P0C874 917 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 CACNA2D1P54289 1103 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 MAP3K7CLP57077 242 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 PDE4CQ08493 712 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 TCEAL5Q5H9L2 206 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 SPATA31D4Q6ZUB0 917 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 TMTC1Q8IUR5 882 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 PASD1Q8IV76 773 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 SCN4BQ8IWT1 228 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 LRRC8AQ8IWT6 810 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 TMEM35BQ8NCS4 154 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 ZMIZ2Q8NF64 920 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 SLC30A5Q8TAD4 765 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 SLC35F5Q8WV83 523 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 CEP295NLQ96MC4 621 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 KCNK16Q96T55 309 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 BAG1Q99933 345 aaPredicted RBP18.82■□□□□ 0.6
SDC2-205ENST00000520233 NHEJ1Q9H9Q4 299 aaPredicted RBP18.82■□□□□ 0.6
SDC2-205ENST00000520233 TMEM30AQ9NV96 361 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 SEPT11Q9NVA2 429 aaKnown RBP18.82■□□□□ 0.6
SDC2-205ENST00000520233 HCFC2Q9Y5Z7 792 aa18.82■□□□□ 0.6
SDC2-205ENST00000520233 RANBP2P49792 3224 aaKnown RBP18.81■□□□□ 0.6
SDC2-205ENST00000520233 F8VP50 259 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 DDX3XO00571 662 aaKnown RBP eCLIP18.81■□□□□ 0.61e-31■■■■□ 20.9
SDC2-205ENST00000520233 PTMAP06454 111 aaKnown RBP18.81■□□□□ 0.6
SDC2-205ENST00000520233 EPCAMP16422 314 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 PLA2G4AP47712 749 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 HYAL1Q12794 435 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 KCNC3Q14003 757 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 CLEC16AQ2KHT3 1053 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 ASTE1Q2TB18 679 aaPredicted RBP18.81■□□□□ 0.6
SDC2-205ENST00000520233 LIN9Q5TKA1 542 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 ELMSAN1Q6PJG2 1045 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 TMEM139Q8IV31 216 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 WDTC1Q8N5D0 677 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 STK32AQ8WU08 396 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 CCDC42Q96M95 316 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.81■□□□□ 0.6
SDC2-205ENST00000520233 DEF6Q9H4E7 631 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 PNPLA8Q9NP80 782 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 ADAMTS1Q9UHI8 967 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 YIPF1Q9Y548 306 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 INSL5Q9Y5Q6 135 aa18.81■□□□□ 0.6
SDC2-205ENST00000520233 HHLA1C9JL84 531 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms