RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 ZNF263O14978 683 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 SPTLC2O15270 562 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 CHADO15335 359 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 NOL4O94818 638 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 IL18RAPO95256 599 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 F13A1P00488 732 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 EGFP01133 1207 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 GARTP22102 1010 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 RAP1GAPP47736 663 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 ID4P47928 161 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 DLG4P78352 724 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 ZNF77Q15935 545 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 SV2CQ496J9 727 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 C1orf220Q5T0J3 134 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 HEATR6Q6AI08 1181 aaKnown RBP9.28□□□□□ -0.92
PABPC1-213ENST00000519848 SLFN12LQ6IEE8 588 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 ARMCX5Q6P1M9 558 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 CNNM4Q6P4Q7 775 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 FAM171BQ6P995 826 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 CMTM8Q8IZV2 173 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 GPD1LQ8N335 351 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 CSGALNACT2Q8N6G5 542 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 LRRC52Q8N7C0 313 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 SPRYD3Q8NCJ5 442 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 KCNG4Q8TDN1 519 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 LEO1Q8WVC0 666 aaPredicted RBP9.28□□□□□ -0.92
PABPC1-213ENST00000519848 MYLPFQ96A32 169 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 XYLT2Q9H1B5 865 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 TASP1Q9H6P5 420 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 SMYD3Q9H7B4 428 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 UPF2Q9HAU5 1272 aaKnown RBP9.28□□□□□ -0.92
PABPC1-213ENST00000519848 INTS13Q9NVM9 706 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 ZSCAN32Q9NX65 697 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 DLL3Q9NYJ7 618 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 HSPBP1Q9NZL4 362 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 HSFX1Q9UBD0 423 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 MAFFQ9ULX9 164 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 PCDHA7Q9UN72 937 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 PCDHGA2Q9Y5H1 932 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 WNT6Q9Y6F9 365 aa9.28□□□□□ -0.92
PABPC1-213ENST00000519848 TNRC6BQ9UPQ9 1833 aaKnown RBP9.28□□□□□ -0.92
PABPC1-213ENST00000519848 MYOFQ9NZM1 2061 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 XPOTO43592 962 aaKnown RBP9.27□□□□□ -0.93
PABPC1-213ENST00000519848 KINO60870 393 aaKnown RBP9.27□□□□□ -0.93
PABPC1-213ENST00000519848 PRPF40AO75400 957 aaKnown RBP9.27□□□□□ -0.93
PABPC1-213ENST00000519848 VNN1O95497 513 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 HNRNPLP14866 589 aaKnown RBP eCLIP9.27□□□□□ -0.93
PABPC1-213ENST00000519848 GMPRP36959 345 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 ALDH1A3P47895 512 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 ASIC1P78348 528 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 DNM1Q05193 864 aaKnown RBP9.27□□□□□ -0.93
PABPC1-213ENST00000519848 ORC1Q13415 861 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 STK38Q15208 465 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 CCDC6Q16204 474 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 FAM26FQ5R3K3 315 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 CCDC73Q6ZRK6 1079 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 C12orf40Q86WS4 652 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 ELMOD1Q8N336 334 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 RDH13Q8NBN7 331 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 LEMD2Q8NC56 503 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 ZNF507Q8TCN5 953 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 SPPL2BQ8TCT7 592 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 BPIFB1Q8TDL5 484 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 RUBCNQ92622 972 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 IRF7Q92985 503 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 SNX21Q969T3 373 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 TSPAN18Q96SJ8 248 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 SPSB2Q99619 263 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 SYT15Q9BQS2 421 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 ZNF518BQ9C0D4 1074 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 TNMDQ9H2S6 317 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 SMOC1Q9H4F8 434 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 GKN1Q9NS71 199 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 CCDC39Q9UFE4 941 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 ITGA11Q9UKX5 1188 aa9.27□□□□□ -0.93
PABPC1-213ENST00000519848 MAGED2Q9UNF1 606 aaPredicted RBP9.27□□□□□ -0.93
PABPC1-213ENST00000519848 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.27□□□□□ -0.93
PABPC1-213ENST00000519848 TTC24A2A3L6 582 aaPredicted RBP9.26□□□□□ -0.93
PABPC1-213ENST00000519848 TULP1O00294 542 aaPredicted RBP9.26□□□□□ -0.93
PABPC1-213ENST00000519848 PPP6R2O75170 966 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 YEATS4O95619 227 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 KRT19P08727 400 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 PDGFRBP09619 1106 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 ZSCAN22P10073 491 aaPredicted RBP9.26□□□□□ -0.93
PABPC1-213ENST00000519848 PDCP20941 246 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 BDNFP23560 247 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 WEE1P30291 646 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 AFMP43652 599 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 CYP2J2P51589 502 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 MYL6P60660 151 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 POU5F1Q01860 360 aaKnown RBP9.26□□□□□ -0.93
PABPC1-213ENST00000519848 CYP24A1Q07973 514 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 TMEM196Q5HYL7 178 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 TDRD10Q5VZ19 366 aaKnown RBP9.26□□□□□ -0.93
PABPC1-213ENST00000519848 RESP18Q5W5W9 173 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 PAQR9Q6ZVX9 377 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 TRAPPC11Q7Z392 1133 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 ARL14EPQ8N8R7 260 aaPredicted RBP9.26□□□□□ -0.93
PABPC1-213ENST00000519848 ZMIZ2Q8NF64 920 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 FAM200AQ8TCP9 573 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms