RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 GPRC5CQ9NQ84 441 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 PGPEP1Q9NXJ5 209 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 PARP2Q9UGN5 583 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 COL4A3BPQ9Y5P4 624 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 SNX11Q9Y5W9 270 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 WNT6Q9Y6F9 365 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 A0A1W2PQF6 199 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 PMS2P1A4D2B8 440 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 H0Y8X5 98 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 ENC1O14682 589 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 TBX3O15119 743 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 OR4Q2P0C623 313 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 CSNK1EP49674 416 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 CDR1P51861 262 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 MRPS21P82921 87 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 SOX4Q06945 474 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 LAMTOR4Q0VGL1 99 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 BYSLQ13895 437 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 NR6A1Q15406 480 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 SF3A1Q15459 793 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 CCDC178Q5BJE1 867 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 Q6ZVU0 165 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 MIB1Q86YT6 1006 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 TMEM130Q8N3G9 435 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 GPATCH3Q96I76 525 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 DPH1Q9BZG8 443 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 FTSJ1Q9UET6 329 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 SUSD2Q9UGT4 822 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 CCDC168Q8NDH2 2452 aa7.47□□□□□ -1.21
CTNNA1-216ENST00000519489 EDIL3O43854 480 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 SEMA7AO75326 666 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 PLEKHA8P1O95397 391 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 NMT1P30419 496 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 UQCRFS1P47985 274 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 NPEPPSP55786 919 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 PTH1RQ03431 593 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 DHX9Q08211 1270 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 DUSP4Q13115 394 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 CLN3Q13286 438 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 SHBQ15464 509 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 UPP1Q16831 310 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 PRAMEF14Q5SWL7 426 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 PPP1R26Q5T8A7 1209 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 PLA2G4FQ68DD2 849 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 NOTUMQ6P988 496 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 KDM7AQ6ZMT4 941 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 CCDC81Q6ZN84 652 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 ANO5Q75V66 913 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 NIPA1Q7RTP0 329 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 C12orf40Q86WS4 652 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 GATAD2AQ86YP4 633 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 SMAP1Q8IYB5 467 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 RFFLQ8WZ73 363 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 PSMG2Q969U7 264 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 PGLYRP2Q96PD5 576 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 ANO3Q9BYT9 981 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 MIR1-1HGQ9H1L0 117 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 RNF41Q9H4P4 317 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 DISC1Q9NRI5 854 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 TDRD15B5MCY1 1934 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 MYLKQ15746 1914 aa7.46□□□□□ -1.22
CTNNA1-216ENST00000519489 VPS37CA5D8V6 355 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 TRAK2O60296 914 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 PCDHGA12O60330 932 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 THP07101 528 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 GNSP15586 552 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 WASP42768 502 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 DNM2P50570 870 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 GABREP78334 506 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 AMPD2Q01433 879 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 PTK2Q05397 1052 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 MBTD1Q05BQ5 628 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 NCAPHQ15003 741 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 PDGFRLQ15198 375 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 TBR1Q16650 682 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 GLRA4Q5JXX5 417 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 TXNDC8Q6A555 127 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 EFCAB13Q8IY85 973 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 CACTIN-AS1Q8N1I8 211 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 CPA6Q8N4T0 437 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 SRBD1Q8N5C6 995 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 RNF149Q8NC42 400 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 OSCP1Q8WVF1 389 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 MIB2Q96AX9 1013 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 LENG9Q96B70 501 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 CCDC51Q96ER9 411 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 CNDP2Q96KP4 475 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 PPP1R10Q96QC0 940 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 SLC22A12Q96S37 553 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 ZNF577Q9BSK1 485 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 SPZ1Q9BXG8 430 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 SLC25A18Q9H1K4 315 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 TMPRSS4Q9NRS4 437 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 CLCA2Q9UQC9 943 aa7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 FBN1P35555 2871 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 NUP210Q8TEM1 1887 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-216ENST00000519489 MED13LQ71F56 2210 aa7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 BCAT2O15382 392 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-216ENST00000519489 C1SP09871 688 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms