RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PDGFRBP09619 1106 aa15.3■□□□□ 0.04
CLN8-204ENST00000519254 TMEM240Q5SV17 173 aa15.3■□□□□ 0.04
CLN8-204ENST00000519254 AADACL2Q6P093 401 aa15.3■□□□□ 0.04
CLN8-204ENST00000519254 PSRC1Q6PGN9 363 aaPredicted RBP15.3■□□□□ 0.04
CLN8-204ENST00000519254 CD300LGQ6UXG3 332 aa15.3■□□□□ 0.04
CLN8-204ENST00000519254 TTC39CQ8N584 583 aa15.3■□□□□ 0.04
CLN8-204ENST00000519254 RUBCNQ92622 972 aa15.3■□□□□ 0.04
CLN8-204ENST00000519254 HEXIM2Q96MH2 286 aaKnown RBP15.3■□□□□ 0.04
CLN8-204ENST00000519254 NT5C1AQ9BXI3 368 aa15.3■□□□□ 0.04
CLN8-204ENST00000519254 MRPL47Q9HD33 250 aaKnown RBP15.3■□□□□ 0.04
CLN8-204ENST00000519254 STIM2Q9P246 746 aa15.3■□□□□ 0.04
CLN8-204ENST00000519254 CYTH4Q9UIA0 394 aa15.3■□□□□ 0.04
CLN8-204ENST00000519254 CCDC66A2RUB6 948 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 NT5C1B-RDH14C9J2C7 533 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 NRP1O14786 923 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 ATP8B1O43520 1251 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 SASH3O75995 380 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 PROSCO94903 275 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 GJB6O95452 261 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 MYBL2P10244 700 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 ODC1P11926 461 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 GNL1P36915 607 aaPredicted RBP15.29■□□□□ 0.04
CLN8-204ENST00000519254 SLC11A1P49279 550 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 BCAR1P56945 870 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 SPOUT1Q5T280 376 aaKnown RBP15.29■□□□□ 0.04
CLN8-204ENST00000519254 ACOT1Q86TX2 421 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 KLHL7Q8IXQ5 586 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 TNS4Q8IZW8 715 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 DPEP3Q9H4B8 488 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 PARVAQ9NVD7 372 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 CXXC1Q9P0U4 656 aaPredicted RBP15.29■□□□□ 0.04
CLN8-204ENST00000519254 NR2E1Q9Y466 385 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 NME7Q9Y5B8 376 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 SCINQ9Y6U3 715 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 CCDC188H7C350 402 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 TADA2AO75478 443 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 GLI1P08151 1106 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 PYGMP11217 842 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 VDRP11473 427 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 ACAT1P24752 427 aaKnown RBP15.29■□□□□ 0.04
CLN8-204ENST00000519254 LMO2P25791 158 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 SLC1A1P43005 524 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 AARSP49588 968 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLN8-204ENST00000519254 BTG3Q14201 252 aaPredicted RBP15.29■□□□□ 0.04
CLN8-204ENST00000519254 CNGA2Q16280 664 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 OSTM1Q86WC4 334 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 ERICH1Q86X53 443 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 FEZF2Q8TBJ5 459 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 RSPH1Q8WYR4 309 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 YME1L1Q96TA2 773 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLN8-204ENST00000519254 FAN1Q9Y2M0 1017 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 CEP83Q9Y592 693 aa15.29■□□□□ 0.04
CLN8-204ENST00000519254 COL4A6Q14031 1691 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 PTPRSQ13332 1948 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 TMEM191CA6NGB0 347 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 O00370 1275 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 RAD51CO43502 376 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 MICAL2O94851 1124 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 ALDH2P05091 517 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 WARSP23381 471 aaKnown RBP15.28■□□□□ 0.04
CLN8-204ENST00000519254 RPL7AP62424 266 aaKnown RBP15.28■□□□□ 0.04
CLN8-204ENST00000519254 PTPN20Q4JDL3 420 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 PPP1R15BQ5SWA1 713 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 LPIN3Q9BQK8 851 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 COLEC11Q9BWP8 271 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 DDX47Q9H0S4 455 aaKnown RBP15.28■□□□□ 0.04
CLN8-204ENST00000519254 FAM49BQ9NUQ9 324 aa15.28■□□□□ 0.04
CLN8-204ENST00000519254 SART1O43290 800 aaKnown RBP15.27■□□□□ 0.04
CLN8-204ENST00000519254 GALTP07902 379 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 CDR1P51861 262 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 RWDD2BP57060 319 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 PSMC1P62191 440 aaKnown RBP15.27■□□□□ 0.04
CLN8-204ENST00000519254 SGO2Q562F6 1265 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 CYP4A22Q5TCH4 519 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 DAB2IPQ5VWQ8 1189 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 UNC93AQ86WB7 457 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 METTL23Q86XA0 190 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 GSPT2Q8IYD1 628 aaKnown RBP15.27■□□□□ 0.04
CLN8-204ENST00000519254 TMEM86AQ8N2M4 240 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 C12orf29Q8N999 325 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 ZNF689Q96CS4 500 aaPredicted RBP15.27■□□□□ 0.04
CLN8-204ENST00000519254 SUSD3Q96L08 255 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 NAP1L3Q99457 506 aaPredicted RBP15.27■□□□□ 0.04
CLN8-204ENST00000519254 PLEKHA4Q9H4M7 779 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 DDX43Q9NXZ2 648 aaKnown RBP15.27■□□□□ 0.04
CLN8-204ENST00000519254 TJP2Q9UDY2 1190 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 ADAM28Q9UKQ2 775 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 KIAA1257Q9ULG3 409 aa15.27■□□□□ 0.04
CLN8-204ENST00000519254 ZSCAN5CA6NGD5 496 aaPredicted RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 SPDYE4A6NLX3 237 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 TMEM189-UBE2V1I3L0A0 370 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 M0QZQ0 153 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 MAP2K7O14733 419 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 HEXIM1O94992 359 aaKnown RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 TNFRSF8P28908 595 aa15.26■□□□□ 0.03
CLN8-204ENST00000519254 ALDH7A1P49419 539 aaKnown RBP15.26■□□□□ 0.03
CLN8-204ENST00000519254 CLUL1Q15846 466 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms