RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ZDHHC7Q9NXF8 308 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 GDAP2Q9NXN4 497 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
SDCBP-206ENST00000519115 GCNT4Q9P109 453 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 NXF1Q9UBU9 619 aaKnown RBP8.09□□□□□ -1.11
SDCBP-206ENST00000519115 PRKAG3Q9UGI9 489 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 INSL5Q9Y5Q6 135 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 EPN1Q9Y6I3 576 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-206ENST00000519115 CLUHO75153 1309 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 MTMR11A4FU01 709 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 EIF3CLB5ME19 914 aaKnown RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 C2CD4DB7Z1M9 353 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 XYLBO75191 536 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 SOAT2O75908 522 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 IPO7O95373 1038 aaKnown RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 C1RP00736 705 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 HLA-DRAP01903 254 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 LRG1P02750 347 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 HNRNPA1P09651 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 ATF2P15336 505 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 HOXA9P31269 272 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 STAT1P42224 750 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 MFAP3P55082 362 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 ADKP55263 362 aaKnown RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 PSMC1P62191 440 aaKnown RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 TNNC1P63316 161 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 MYL7Q01449 175 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 TSPY1Q01534 308 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 PPP3CAQ08209 521 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 NCOA4Q13772 614 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 SOWAHAQ2M3V2 549 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 ZNF699Q32M78 642 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 WDR72Q3MJ13 1102 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 CBWD6Q4V339 395 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 DCAF17Q5H9S7 520 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 CBWD3Q5JTY5 395 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 CBWD5Q5RIA9 395 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 SFMBT2Q5VUG0 894 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 TPGS2Q68CL5 300 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 WDR59Q6PJI9 974 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 GET4Q7L5D6 327 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 IRF2BP2Q7Z5L9 587 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 GRASPQ7Z6J2 395 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 VPS36Q86VN1 386 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 ZNF677Q86XU0 584 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 TCEAL8Q8IYN2 117 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 THEM5Q8N1Q8 247 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 TMEM86AQ8N2M4 240 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 TOP6BLQ8N6T0 577 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 KBTBD7Q8WVZ9 684 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 KHSRPQ92945 711 aaKnown RBP eCLIP8.08□□□□□ -1.125e-6■■■■□ 22.3
SDCBP-206ENST00000519115 CCDC42Q96M95 316 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 EIF3CQ99613 913 aaKnown RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 MRPL45Q9BRJ2 306 aaKnown RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 PI4K2AQ9BTU6 479 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 IMPG2Q9BZV3 1241 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 ZCWPW1Q9H0M4 648 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 CRISPLD1Q9H336 500 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 SMYD3Q9H7B4 428 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 SIX2Q9NPC8 291 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 FAM207AQ9NSI2 230 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 DDX43Q9NXZ2 648 aaKnown RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 ABI2Q9NYB9 513 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 MYO1AQ9UBC5 1043 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 AFF4Q9UHB7 1163 aaKnown RBP8.08□□□□□ -1.12
SDCBP-206ENST00000519115 INTUQ9ULD6 942 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 CNTN6Q9UQ52 1028 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 YIPF1Q9Y548 306 aa8.08□□□□□ -1.12
SDCBP-206ENST00000519115 ANAPC1Q9H1A4 1944 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 MYO16Q9Y6X6 1858 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 LOC730098B7Z3J9 87 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 RNF225M0QZC1 329 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-206ENST00000519115 TNFRSF10AO00220 468 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 ATP2C2O75185 946 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 LRRN2O75325 713 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 ASS1P00966 412 aaKnown RBP8.07□□□□□ -1.12
SDCBP-206ENST00000519115 PDGFRBP09619 1106 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 CCDC175P0C221 793 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 SLC9A1P19634 815 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 LMO2P25791 158 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 GBP2P32456 591 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-206ENST00000519115 SOX5P35711 763 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 RAP1GAPP47736 663 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 POLR2FP61218 127 aaKnown RBP8.07□□□□□ -1.12
SDCBP-206ENST00000519115 YWHAEP62258 255 aaKnown RBP8.07□□□□□ -1.12
SDCBP-206ENST00000519115 TWF1Q12792 350 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 DUSP4Q13115 394 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 GPR17Q13304 367 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 ASTE1Q2TB18 679 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-206ENST00000519115 ZNF667Q5HYK9 610 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 HGSNATQ68CP4 663 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 SPOPLQ6IQ16 392 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 MAMSTRQ6ZN01 415 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 RRAGAQ7L523 313 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 LRRTM3Q86VH5 581 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 FAM71AQ8IYT1 594 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 TDRD5Q8NAT2 981 aaKnown RBP8.07□□□□□ -1.12
SDCBP-206ENST00000519115 TAS1R2Q8TE23 839 aa8.07□□□□□ -1.12
SDCBP-206ENST00000519115 CPLX3Q8WVH0 158 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms