RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 ITIH3Q06033 890 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 CLUL1Q15846 466 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 LEXMQ3ZCV2 418 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 TMC5Q6UXY8 1006 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 CYP26C1Q6V0L0 522 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 EP400NLQ6ZTU2 488 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 BAP1Q92560 729 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 SMARCD1Q96GM5 515 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 HEXIM2Q96MH2 286 aaKnown RBP13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 SMOQ99835 787 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 APOL5Q9BWW9 433 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 ADAM7Q9H2U9 754 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 CSNK1G1Q9HCP0 422 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 ACP6Q9NPH0 428 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 NLRC4Q9NPP4 1024 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 KRT82Q9NSB4 513 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 ATP8B3O60423 1300 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 ITIH6Q6UXX5 1313 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 CBFA2T2O43439 604 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 MBTPS2O43462 519 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 BEST1O76090 585 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 LRG1P02750 347 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 TRIM21P19474 475 aaKnown RBP13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 BRD2P25440 801 aaKnown RBP13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 ADORA2BP29275 332 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 TFF2Q03403 129 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 PLD1Q13393 1074 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 SMAD4Q13485 552 aaKnown RBP13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 PKDCCQ504Y2 493 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 SGO2Q562F6 1265 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 FIGNQ5HY92 759 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 CLEC20AQ6ZU45 233 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 TTC30AQ86WT1 665 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 TMC8Q8IU68 726 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 STKLD1Q8NE28 680 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 SMG7Q92540 1137 aaKnown RBP13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 PSMG2Q969U7 264 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 C8orf48Q96LL4 319 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 PCMTD1Q96MG8 357 aaPredicted RBP13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 MED10Q9BTT4 135 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 LRRC3Q9BY71 257 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 DNAI2Q9GZS0 605 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 THEGQ9P2T0 379 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 TSPAN16Q9UKR8 245 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 KIAA1257Q9ULG3 409 aa13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.32□□□□□ -0.28
IGHV3-6-201ENST00000518407 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 HHLA1C9JL84 531 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 F8VP50 259 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 TNFRSF10BO14763 440 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 TRIM66O15016 1216 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 CYP26A1O43174 497 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 AP1G2O75843 785 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 FAM200BP0CF97 657 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 CD19P15391 556 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 GNA15P30679 374 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 SOX5P35711 763 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 ALDH1A3P47895 512 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 EPHA5P54756 1037 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 RPL10AP62906 217 aaKnown RBP13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 DDR2Q16832 855 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 GOLGA7BQ2TAP0 167 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 SDHAF4Q5VUM1 108 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 LCLAT1Q6UWP7 414 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 SPATA17Q96L03 361 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 CEP295NLQ96MC4 621 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 KCNK16Q96T55 309 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 ZNF334Q9HCZ1 680 aaPredicted RBP13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 DMAP1Q9NPF5 467 aaPredicted RBP13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 HCFC1R1Q9NWW0 138 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 DNMT3BQ9UBC3 853 aaKnown RBP13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 USP15Q9Y4E8 981 aaPredicted RBP13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 ASB3Q9Y575 518 aa13.31□□□□□ -0.28
IGHV3-6-201ENST00000518407 NRG2O14511 850 aaPredicted RBP13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 XYLBO75191 536 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 TPM3P06753 285 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 CFHP08603 1231 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 NPR3P17342 541 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 GRIK1P39086 918 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 USP8P40818 1118 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 MTHFRP42898 656 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 BCAT1P54687 386 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 EPHB3P54753 998 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 NTHL1P78549 312 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 MTMR3Q13615 1198 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 STILQ15468 1287 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 CNGA2Q16280 664 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 MEA1Q16626 185 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 PRSS36Q5K4E3 855 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 SLC47A2Q86VL8 602 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 SCN4BQ8IWT1 228 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 HS6ST3Q8IZP7 471 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 ANKRD52Q8NB46 1076 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 GPR152Q8TDT2 470 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 EPS8L1Q8TE68 723 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 GIPC2Q8TF65 315 aa13.3□□□□□ -0.28
IGHV3-6-201ENST00000518407 ZNF606Q8WXB4 792 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms