RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 RPS9P46781 194 aaKnown RBP11.28□□□□□ -0.6
SPIDR-205ENST00000518060 DLG4P78352 724 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 TRIM68Q6AZZ1 485 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 FAM171BQ6P995 826 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 VSTM1Q6UX27 236 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 TMEM150AQ86TG1 271 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 MON1AQ86VX9 555 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 ADSSL1Q8N142 457 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 PARD3BQ8TEW8 1205 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 ATRIPQ8WXE1 791 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 USP13Q92995 863 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-205ENST00000518060 CLDN23Q96B33 292 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 TRMT2BQ96GJ1 504 aaKnown RBP11.28□□□□□ -0.6
SPIDR-205ENST00000518060 ZNF518BQ9C0D4 1074 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-205ENST00000518060 KCTD10Q9H3F6 313 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 EBF3Q9H4W6 596 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 KIF9Q9HAQ2 790 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 GKN1Q9NS71 199 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 TDP1Q9NUW8 608 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 ATP8B3O60423 1300 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 FAM237AA0A1B0GTK4 181 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 F8VP50 259 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 TADA3O75528 432 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 RHOBTB3O94955 611 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 USP17L7P0C7H9 530 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 TRIM49P0CI25 452 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 TRIM49CP0CI26 452 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 PTPN1P18031 435 aaKnown RBP11.27□□□□□ -0.61
SPIDR-205ENST00000518060 WEE1P30291 646 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 IFNAR2P48551 515 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 CDH8P55286 799 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 NUCB2P80303 420 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 DPYDQ12882 1025 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 ORC1Q13415 861 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 PPP2R5DQ14738 602 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 PON2Q15165 354 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 ITPRIPL2Q3MIP1 535 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 C1orf228Q6PIY5 440 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 DENND5BQ6ZUT9 1274 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 LIMS2Q7Z4I7 341 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 SLC9A9Q8IVB4 645 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 SMYD4Q8IYR2 804 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-205ENST00000518060 MAML2Q8IZL2 1156 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-205ENST00000518060 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-205ENST00000518060 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 IMPG2Q9BZV3 1241 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 ELOVL4Q9GZR5 314 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 XYLT2Q9H1B5 865 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 CHRDQ9H2X0 955 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 RBM12Q9NTZ6 932 aaKnown RBP11.27□□□□□ -0.61
SPIDR-205ENST00000518060 DMAC2Q9NW81 257 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 EHD2Q9NZN4 543 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 TRPM5Q9NZQ8 1165 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 FBXO4Q9UKT5 387 aa11.27□□□□□ -0.61
SPIDR-205ENST00000518060 RIF1Q5UIP0 2472 aaKnown RBP11.26□□□□□ -0.61
SPIDR-205ENST00000518060 C2orf78A6NCI8 922 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 SHISA7A6NL88 538 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 CLDN5O00501 218 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 VNN1O95497 513 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 STAU1O95793 577 aaKnown RBP11.26□□□□□ -0.61
SPIDR-205ENST00000518060 ARSAP15289 507 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 HDCP19113 662 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 TRIM21P19474 475 aaKnown RBP11.26□□□□□ -0.61
SPIDR-205ENST00000518060 RPL13P26373 211 aaKnown RBP11.26□□□□□ -0.61
SPIDR-205ENST00000518060 GCLMP48507 274 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 PDE6CP51160 858 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 CCR3P51677 355 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 VAMP7P51809 220 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 USP46P62068 366 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 FAM160A1Q05DH4 1040 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 PNOCQ13519 176 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 MTF1Q14872 753 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 SPOPLQ6IQ16 392 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 TXNDC11Q6PKC3 985 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 Q6ZS52 159 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 RALGPS2Q86X27 583 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-205ENST00000518060 FAM186BQ8IYM0 893 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 CCDC150Q8NCX0 1101 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 TNIP3Q96KP6 325 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 SPATA17Q96L03 361 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 MYRFLQ96LU7 910 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 CYP2S1Q96SQ9 504 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 B3GNT5Q9BYG0 378 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 SEMA4AQ9H3S1 761 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 RMND1Q9NWS8 449 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 NME7Q9Y5B8 376 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 WNT6Q9Y6F9 365 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 MIA3Q5JRA6 1907 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 TICRRQ7Z2Z1 1910 aa11.26□□□□□ -0.61
SPIDR-205ENST00000518060 F5P12259 2224 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 PTPRZ1P23471 2315 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-205ENST00000518060 AKAP3O75969 853 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 HLA-DRAP01903 254 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 C4BPAP04003 597 aaKnown RBP11.25□□□□□ -0.61
SPIDR-205ENST00000518060 CHRNB1P11230 501 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 CACNA2D1P54289 1103 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 ADAM9Q13443 819 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 RUNX3Q13761 415 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms