RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ITIH2P19823 946 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 IL1R2P27930 398 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 TAF6P49848 677 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 CACNB2Q08289 660 aaPredicted RBP27.92■■■□□ 2.06
COL13A1-210ENST00000517713 ZNF844Q08AG5 666 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 KCTD16Q68DU8 428 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 TMBIM4Q9HC24 238 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 ASNSD1Q9NWL6 643 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 RPS6KA5O75582 802 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 RNF8O76064 485 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 SETSIPP0DME0 302 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 RGS7P49802 495 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 SV2CQ496J9 727 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 ARHGAP17Q68EM7 881 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 PMF1Q6P1K2 205 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 KBTBD7Q8WVZ9 684 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 SNF8Q96H20 258 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 DPEP3Q9H4B8 488 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 NEU2Q9Y3R4 380 aa27.92■■■□□ 2.06
COL13A1-210ENST00000517713 C3orf70A6NLC5 250 aaPredicted RBP27.91■■■□□ 2.06
COL13A1-210ENST00000517713 GNL1P36915 607 aaPredicted RBP27.91■■■□□ 2.06
COL13A1-210ENST00000517713 ZNF143P52747 638 aaPredicted RBP27.91■■■□□ 2.06
COL13A1-210ENST00000517713 TRIP13Q15645 432 aaPredicted RBP27.91■■■□□ 2.06
COL13A1-210ENST00000517713 SMTNL2Q2TAL5 461 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 WNT8BQ93098 351 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 PABPC3Q9H361 631 aaKnown RBP27.91■■■□□ 2.06
COL13A1-210ENST00000517713 ST3GAL5Q9UNP4 418 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 TULP2O00295 520 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 LIASO43766 372 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 MYZAPP0CAP1 466 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 FGFR1P11362 822 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 GPD1P21695 349 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 IVDP26440 423 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 LMNB2Q03252 620 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 ZNF365Q70YC5 407 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 SERINC5Q86VE9 423 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 APPL2Q8NEU8 664 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 SLC35F5Q8WV83 523 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 ATP6V1G3Q96LB4 118 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 SLC4A5Q9BY07 1137 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 SNX25Q9H3E2 840 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 XPNPEP3Q9NQH7 507 aa27.91■■■□□ 2.06
COL13A1-210ENST00000517713 ADAMTS4O75173 837 aa27.9■■■□□ 2.06
COL13A1-210ENST00000517713 PDGFRBP09619 1106 aa27.9■■■□□ 2.06
COL13A1-210ENST00000517713 ATF2P15336 505 aa27.9■■■□□ 2.06
COL13A1-210ENST00000517713 SLMAPQ14BN4 828 aa27.9■■■□□ 2.06
COL13A1-210ENST00000517713 KCNT1Q5JUK3 1230 aa27.9■■■□□ 2.06
COL13A1-210ENST00000517713 DRICH1Q6PGQ1 229 aaPredicted RBP27.9■■■□□ 2.06
COL13A1-210ENST00000517713 CRYBG2Q8N1P7 616 aa27.9■■■□□ 2.06
COL13A1-210ENST00000517713 SH2D3CQ8N5H7 860 aa27.9■■■□□ 2.06
COL13A1-210ENST00000517713 LPIN3Q9BQK8 851 aa27.9■■■□□ 2.06
COL13A1-210ENST00000517713 PTGESO14684 152 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 HCRTO43612 131 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 CTSHP09668 335 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 MIPP30301 263 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 ADCY8P40145 1251 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 LIMS2Q7Z4I7 341 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 CNPY3Q9BT09 278 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 SENP6Q9GZR1 1112 aaPredicted RBP27.89■■■□□ 2.06
COL13A1-210ENST00000517713 EPB41L4BQ9H329 900 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 PCSK1NQ9UHG2 260 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 EFR3BQ9Y2G0 817 aa27.89■■■□□ 2.06
COL13A1-210ENST00000517713 C2CD4BA6NLJ0 364 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 HMGB1P1B2RPK0 211 aaPredicted RBP27.89■■■□□ 2.05
COL13A1-210ENST00000517713 TP73O15350 636 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 CHRNA1P02708 482 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 CAPN2P17655 700 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 LMO2P25791 158 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 EIF3BP55884 814 aaKnown RBP27.89■■■□□ 2.05
COL13A1-210ENST00000517713 BYSLQ13895 437 aaKnown RBP27.89■■■□□ 2.05
COL13A1-210ENST00000517713 GSTA5Q7RTV2 222 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 TMEM110Q86TL2 294 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 CCDC89Q8N998 374 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 SMC1BQ8NDV3 1235 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 RXFP2Q8WXD0 754 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 PIWIL1Q96J94 861 aaKnown RBP27.89■■■□□ 2.05
COL13A1-210ENST00000517713 DNAI2Q9GZS0 605 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 DNPEPQ9ULA0 475 aa27.89■■■□□ 2.05
COL13A1-210ENST00000517713 PCNTO95613 3336 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 HUS1O60921 280 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 TRUB2O95900 331 aaKnown RBP27.88■■■□□ 2.05
COL13A1-210ENST00000517713 ASGR1P07306 291 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 PDGFRAP16234 1089 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 KDELR1P24390 212 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 LRPAP1P30533 357 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 PCK1P35558 622 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 SNX16P57768 344 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 LILRA4P59901 499 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 PDE4CQ08493 712 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 ZNF618Q5T7W0 954 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 STK32AQ8WU08 396 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 PPP1R10Q96QC0 940 aaKnown RBP27.88■■■□□ 2.05
COL13A1-210ENST00000517713 CHST12Q9NRB3 414 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 USP18Q9UMW8 372 aa27.88■■■□□ 2.05
COL13A1-210ENST00000517713 RARGP13631 454 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 CCND3P30281 292 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-210ENST00000517713 CAV1Q03135 178 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 TRNP1Q6NT89 227 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 RHBDF2Q6PJF5 856 aa27.87■■■□□ 2.05
COL13A1-210ENST00000517713 OLFML1Q6UWY5 402 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms