RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 SNX16P57768 344 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 TGFB2P61812 414 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 DLG4P78352 724 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 MRPS9P82933 396 aaKnown RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 IL9RQ01113 521 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 MAP2K1Q02750 393 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 KLF1Q13351 362 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 NEDD9Q14511 834 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 MXD4Q14582 209 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 COG2Q14746 738 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 MORF4L2Q15014 288 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SIX1Q15475 284 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SNCBQ16143 134 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 CNGA2Q16280 664 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SGSM1Q2NKQ1 1148 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 PARP6Q2NL67 630 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SGO2Q562F6 1265 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ANKRD20A8PQ5CZ79 823 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 LGSNQ5TDP6 509 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ARHGEF16Q5VV41 709 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 PLEKHA7Q6IQ23 1121 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 MIS18BP1Q6P0N0 1132 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 GJB7Q6PEY0 223 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 BEND4Q6ZU67 534 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZNF365Q70YC5 407 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ANO5Q75V66 913 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 POLNQ7Z5Q5 900 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 NOP9Q86U38 636 aaKnown RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 EXOC3L1Q86VI1 746 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SLC47A2Q86VL8 602 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 VSIG1Q86XK7 387 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 APLFQ8IW19 511 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 FAM20CQ8IXL6 584 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 CCDC13Q8IYE1 715 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 THNSL1Q8IYQ7 743 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ABRAQ8N0Z2 381 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZCCHC9Q8N567 271 aaKnown RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SH2D3CQ8N5H7 860 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 NIPA2Q8N8Q9 360 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 BANK1Q8NDB2 785 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 CHST13Q8NET6 341 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 FEZF2Q8TBJ5 459 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ACER1Q8TDN7 264 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SYTL5Q8TDW5 730 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 FNIP1Q8TF40 1166 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 CKAP2Q8WWK9 683 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 TCP11Q8WWU5 503 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 POMGNT1Q8WZA1 660 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 GLG1Q92896 1179 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ARHGEF2Q92974 986 aaKnown RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZNF653Q96CK0 615 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ARHGEF26Q96DR7 871 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 C12orf42Q96LP6 360 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 KREMEN1Q96MU8 473 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 TMEM237Q96Q45 408 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 RAB3IPQ96QF0 476 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 FNBP1Q96RU3 617 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 PCDHB18PQ96TA0 734 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 HINFPQ9BQA5 517 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 PDCD2LQ9BRP1 358 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 CELF4Q9BZC1 486 aaKnown RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 OSBPL7Q9BZF2 842 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 IMPG2Q9BZV3 1241 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 NEUROG2Q9H2A3 272 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 LHX5Q9H2C1 402 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 DPH5Q9H2P9 285 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 EPB41L4BQ9H329 900 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SEMA4AQ9H3S1 761 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ATP6V0A4Q9HBG4 840 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 IFT122Q9HBG6 1241 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 RXFP1Q9HBX9 757 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 CYP26B1Q9NR63 512 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 PXMP2Q9NR77 195 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SEPT11Q9NVA2 429 aaKnown RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 NKIRAS1Q9NYS0 192 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SMARCAL1Q9NZC9 954 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 KLHL14Q9P2G3 628 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ARHGAP28Q9P2N2 729 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 FBXO40Q9UH90 709 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZNF112Q9UJU3 913 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 AJAP1Q9UKB5 411 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SLC12A4Q9UP95 1085 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 DOLKQ9UPQ8 538 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 SMG5Q9UPR3 1016 aaKnown RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 NEU2Q9Y3R4 380 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 USP15Q9Y4E8 981 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 MAFBQ9Y5Q3 323 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 DICER1Q9UPY3 1922 aaKnown RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 CNTNAP1P78357 1384 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 MGAMO43451 1857 aa3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 BRCA1P38398 1863 aaKnown RBP3.22□□□□□ -1.89
RN7SKP43-201ENST00000516173 ADGRA3Q8IWK6 1321 aa3.21□□□□□ -1.89
RN7SKP43-201ENST00000516173 PTPRFP10586 1907 aa3.21□□□□□ -1.9
RN7SKP43-201ENST00000516173 IGKV6D-21A0A0A0MT36 114 aa3.21□□□□□ -1.9
RN7SKP43-201ENST00000516173 A0A0B4J269 797 aa3.21□□□□□ -1.9
RN7SKP43-201ENST00000516173 TLDC2A0PJX2 215 aa3.21□□□□□ -1.9
RN7SKP43-201ENST00000516173 TMEM191CA6NGB0 347 aa3.21□□□□□ -1.9
RN7SKP43-201ENST00000516173 FAM47DPA6NHR8 397 aa3.21□□□□□ -1.9
RN7SKP43-201ENST00000516173 SIGLEC16A6NMB1 481 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms