RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CRYBG2Q8N1P7 616 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 NELFBQ8WX92 580 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 SLC35C1Q96A29 364 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 EEF2KMTQ96G04 330 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 SHDQ96IW2 340 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 TRMT61BQ9BVS5 477 aaKnown RBP13.61□□□□□ -0.23
CLCN3-210ENST00000515420 TTLL2Q9BWV7 592 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 DNAI2Q9GZS0 605 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 SDCBP2Q9H190 292 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 DPEP3Q9H4B8 488 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 ARHGEF3Q9NR81 526 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 COL4A2P08572 1712 aa13.61□□□□□ -0.23
CLCN3-210ENST00000515420 MYH10P35580 1976 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 KRBA1A5PL33 1030 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 BIN1O00499 593 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 GNA14O95837 355 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 PFKLP17858 780 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 AVPR2P30518 371 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 GRIK1P39086 918 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 RAP1GAPP47736 663 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 CDR1P51861 262 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
CLCN3-210ENST00000515420 STARD6P59095 220 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 FCHO2Q0JRZ9 810 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 DCAF17Q5H9S7 520 aaPredicted RBP13.6□□□□□ -0.23
CLCN3-210ENST00000515420 STXBP5Q5T5C0 1151 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 TCERG1LQ5VWI1 586 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 SPOPLQ6IQ16 392 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 KLHL10Q6JEL2 608 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 VITQ6UXI7 678 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 DENND5BQ6ZUT9 1274 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 ARID3BQ8IVW6 561 aaPredicted RBP13.6□□□□□ -0.23
CLCN3-210ENST00000515420 MRPS31Q92665 395 aaKnown RBP13.6□□□□□ -0.23
CLCN3-210ENST00000515420 IRF7Q92985 503 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 IPO9Q96P70 1041 aaKnown RBP13.6□□□□□ -0.23
CLCN3-210ENST00000515420 GBP4Q96PP9 640 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 DUSP9Q99956 384 aaKnown RBP13.6□□□□□ -0.23
CLCN3-210ENST00000515420 PLA2G2FQ9BZM2 168 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 CLSTN2Q9H4D0 955 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 APOBEC3GQ9HC16 384 aaKnown RBP13.6□□□□□ -0.23
CLCN3-210ENST00000515420 RAB20Q9NX57 234 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 PATJQ8NI35 1801 aa13.6□□□□□ -0.23
CLCN3-210ENST00000515420 MUC6Q6W4X9 2439 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 F8VP50 259 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 DPYSL4O14531 572 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 NPR3P17342 541 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 AOC1P19801 751 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 PPP3CCP48454 512 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 NDST1P52848 882 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 CYP4F8P98187 520 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 CAMK4Q16566 473 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 WDR44Q5JSH3 913 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 SDHAF4Q5VUM1 108 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 CWF19L1Q69YN2 538 aaKnown RBP13.59□□□□□ -0.23
CLCN3-210ENST00000515420 FAM35AQ86V20 835 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 CMTM8Q8IZV2 173 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 SMARCD1Q96GM5 515 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 DDX23Q9BUQ8 820 aaKnown RBP13.59□□□□□ -0.23
CLCN3-210ENST00000515420 NT5C1AQ9BXI3 368 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 B3GNT5Q9BYG0 378 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 MMRN2Q9H8L6 949 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 BRD9Q9H8M2 597 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 KIF9Q9HAQ2 790 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 MAGED2Q9UNF1 606 aaPredicted RBP13.59□□□□□ -0.23
CLCN3-210ENST00000515420 CTNND2Q9UQB3 1225 aa13.59□□□□□ -0.23
CLCN3-210ENST00000515420 HELZP42694 1942 aaKnown RBP13.58□□□□□ -0.23
CLCN3-210ENST00000515420 MIA3Q5JRA6 1907 aa13.58□□□□□ -0.23
CLCN3-210ENST00000515420 WDFY4Q6ZS81 3184 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 HEPACAM2A8MVW5 462 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 CHADO15335 359 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 P4HA2O15460 535 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 CILPO75339 1184 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 TADA3O75528 432 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 FGFR1OPO95684 399 aaKnown RBP13.58□□□□□ -0.24
CLCN3-210ENST00000515420 AVPR1AP37288 418 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 VIPR2P41587 438 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 PDE6CP51160 858 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 VCPP55072 806 aaKnown RBP13.58□□□□□ -0.24
CLCN3-210ENST00000515420 MLLT6P55198 1093 aaPredicted RBP13.58□□□□□ -0.24
CLCN3-210ENST00000515420 ZNF268Q14587 947 aaPredicted RBP13.58□□□□□ -0.24
CLCN3-210ENST00000515420 MLF2Q15773 248 aaPredicted RBP13.58□□□□□ -0.24
CLCN3-210ENST00000515420 CCDC40Q4G0X9 1142 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 CBWD6Q4V339 395 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 SLC44A4Q53GD3 710 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 CBWD3Q5JTY5 395 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 CBWD5Q5RIA9 395 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 ACOT1Q86TX2 421 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 MON1AQ86VX9 555 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 CELF5Q8N6W0 485 aaKnown RBP13.58□□□□□ -0.24
CLCN3-210ENST00000515420 MLKLQ8NB16 471 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 ST13P5Q8NFI4 369 aaPredicted RBP13.58□□□□□ -0.24
CLCN3-210ENST00000515420 OVCA2Q8WZ82 227 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 SEMA4DQ92854 862 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 SLC46A2Q9BY10 475 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 OSBPL6Q9BZF3 934 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 TBC1D17Q9HA65 648 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 DMAP1Q9NPF5 467 aaPredicted RBP13.58□□□□□ -0.24
CLCN3-210ENST00000515420 LMBRD1Q9NUN5 540 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 COMMD8Q9NX08 183 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms