RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PSMC2P35998 433 aaKnown RBP26.12■■□□□ 1.77
SNF8-213ENST00000514929 PIK3CAP42336 1068 aa26.12■■□□□ 1.77
SNF8-213ENST00000514929 RAP1GAPP47736 663 aa26.12■■□□□ 1.77
SNF8-213ENST00000514929 MON1AQ86VX9 555 aa26.12■■□□□ 1.77
SNF8-213ENST00000514929 B3GALNT2Q8NCR0 500 aa26.12■■□□□ 1.77
SNF8-213ENST00000514929 ELMO3Q96BJ8 720 aa26.12■■□□□ 1.77
SNF8-213ENST00000514929 SPATA17Q96L03 361 aa26.12■■□□□ 1.77
SNF8-213ENST00000514929 GSDMAQ96QA5 445 aa26.12■■□□□ 1.77
SNF8-213ENST00000514929 NDRG2Q9UN36 371 aaKnown RBP26.12■■□□□ 1.77
SNF8-213ENST00000514929 COL4A2P08572 1712 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 SOBPA7XYQ1 873 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 TRIM66O15016 1216 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 EDRF1Q3B7T1 1238 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 ZCWPW2Q504Y3 356 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 C1orf220Q5T0J3 134 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 C1orf210Q8IVY1 113 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 TAF4BQ92750 862 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 ZFYVE19Q96K21 471 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 CEP295NLQ96MC4 621 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 TIGD1Q96MW7 591 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 THG1LQ9NWX6 298 aaKnown RBP26.11■■□□□ 1.77
SNF8-213ENST00000514929 PIEZO1Q92508 2521 aa26.11■■□□□ 1.77
SNF8-213ENST00000514929 SHISA7A6NL88 538 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 TADA3O75528 432 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 HLA-DRAP01903 254 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 TRIM49P0CI25 452 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 TRIM49CP0CI26 452 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 NBL1P41271 181 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 MAGEA9P43362 315 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 KPNA1P52294 538 aaPredicted RBP26.1■■□□□ 1.77
SNF8-213ENST00000514929 ZNF658Q5TYW1 1059 aaPredicted RBP26.1■■□□□ 1.77
SNF8-213ENST00000514929 DENND5BQ6ZUT9 1274 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 FAM3CQ92520 227 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 SMARCE1Q969G3 411 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 ELOVL4Q9GZR5 314 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 TRPC7Q9HCX4 862 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 SPATA6Q9NWH7 488 aaPredicted RBP26.1■■□□□ 1.77
SNF8-213ENST00000514929 DENND4CQ5VZ89 1909 aa26.1■■□□□ 1.77
SNF8-213ENST00000514929 OBSL1O75147 1896 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 GCLMP48507 274 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 PLCB2Q00722 1185 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 ERCC4Q92889 916 aaPredicted RBP26.09■■□□□ 1.77
SNF8-213ENST00000514929 USP13Q92995 863 aaPredicted RBP26.09■■□□□ 1.77
SNF8-213ENST00000514929 TNIP3Q96KP6 325 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 C8orf48Q96LL4 319 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 IMPG2Q9BZV3 1241 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 SDCBP2Q9H190 292 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 MMRN2Q9H8L6 949 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 KIF9Q9HAQ2 790 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 TDP1Q9NUW8 608 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 EHD2Q9NZN4 543 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 PCDHA5Q9Y5H7 936 aa26.09■■□□□ 1.77
SNF8-213ENST00000514929 F8VP50 259 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 ASS1P00966 412 aaKnown RBP26.08■■□□□ 1.77
SNF8-213ENST00000514929 PRCPP42785 496 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 MLLT6P55198 1093 aaPredicted RBP26.08■■□□□ 1.77
SNF8-213ENST00000514929 ENPEPQ07075 957 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 FRMD5Q7Z6J6 570 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 CLDN23Q96B33 292 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 EEF2KMTQ96G04 330 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 MSANTD3Q96H12 275 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 B3GNT5Q9BYG0 378 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 ZNF518BQ9C0D4 1074 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 C8orf33Q9H7E9 229 aaPredicted RBP26.08■■□□□ 1.77
SNF8-213ENST00000514929 CCL26Q9Y258 94 aa26.08■■□□□ 1.77
SNF8-213ENST00000514929 PTPRDP23468 1912 aa26.08■■□□□ 1.76
SNF8-213ENST00000514929 TRAV19A0A0A6YYK7 116 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 PROB1E7EW31 1015 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 CLDN5O00501 218 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 CETN3O15182 167 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 CCNE1P24864 410 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 PPP3CAQ08209 521 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 SPOPLQ6IQ16 392 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 C1orf228Q6PIY5 440 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 TTC8Q8TAM2 541 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 TSG101Q99816 390 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 MED10Q9BTT4 135 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.07■■□□□ 1.76
SNF8-213ENST00000514929 GTSE1Q9NYZ3 720 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 ATP8B3O60423 1300 aa26.07■■□□□ 1.76
SNF8-213ENST00000514929 LAMTOR5O43504 91 aa26.06■■□□□ 1.76
SNF8-213ENST00000514929 KINO60870 393 aaKnown RBP26.06■■□□□ 1.76
SNF8-213ENST00000514929 CKMP06732 381 aa26.06■■□□□ 1.76
SNF8-213ENST00000514929 USP17L7P0C7H9 530 aa26.06■■□□□ 1.76
SNF8-213ENST00000514929 EPB41P11171 864 aaKnown RBP26.06■■□□□ 1.76
SNF8-213ENST00000514929 RPS9P46781 194 aaKnown RBP26.06■■□□□ 1.76
SNF8-213ENST00000514929 SOX9P48436 509 aa26.06■■□□□ 1.76
SNF8-213ENST00000514929 USP46P62068 366 aa26.06■■□□□ 1.76
SNF8-213ENST00000514929 SPATA20Q8TB22 786 aa26.06■■□□□ 1.76
SNF8-213ENST00000514929 GTPBP4Q9BZE4 634 aaKnown RBP26.06■■□□□ 1.76
SNF8-213ENST00000514929 GKN1Q9NS71 199 aa26.06■■□□□ 1.76
SNF8-213ENST00000514929 TRPM5Q9NZQ8 1165 aa26.06■■□□□ 1.76
SNF8-213ENST00000514929 CIZ1Q9ULV3 898 aaPredicted RBP26.06■■□□□ 1.76
SNF8-213ENST00000514929 GFRA3O60609 400 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 CACNA2D1P54289 1103 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 NOP14P78316 857 aaKnown RBP26.05■■□□□ 1.76
SNF8-213ENST00000514929 TNK2Q07912 1038 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 ZNF268Q14587 947 aaPredicted RBP26.05■■□□□ 1.76
SNF8-213ENST00000514929 COBLL1Q53SF7 1204 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 CC2D1AQ6P1N0 951 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms