RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 CNOT6Q9ULM6 557 aaKnown RBP5.96□□□□□ -1.46
RFC1-216ENST00000514572 SHOC2Q9UQ13 582 aa5.96□□□□□ -1.46
RFC1-216ENST00000514572 CLCA2Q9UQC9 943 aa5.96□□□□□ -1.46
RFC1-216ENST00000514572 LAMC3Q9Y6N6 1575 aa5.96□□□□□ -1.46
RFC1-216ENST00000514572 BAZ1BQ9UIG0 1483 aaKnown RBP5.96□□□□□ -1.46
RFC1-216ENST00000514572 NESP48681 1621 aa5.96□□□□□ -1.46
RFC1-216ENST00000514572 SMARCA4P51532 1647 aa5.96□□□□□ -1.46
RFC1-216ENST00000514572 FAM90A18PA6NE21 464 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 FAM90A16PA6NEW6 464 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 FAM90A9PA6NNJ1 464 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 PRSS47A8MTI9 375 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 FAM90A5PA8MXJ8 464 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 B4E171 279 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 POLRMTO00411 1230 aaKnown RBP5.95□□□□□ -1.46
RFC1-216ENST00000514572 RNASEH2AO75792 299 aaKnown RBP5.95□□□□□ -1.46
RFC1-216ENST00000514572 SOAT2O75908 522 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 TK1P04183 234 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 INHBBP09529 407 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 FAM90A15PP0C7V4 464 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 FAM90A14PP0C7W9 464 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 JUPP14923 745 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 KCNA3P22001 575 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 MGAT1P26572 445 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 TSPAN7P41732 249 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 DGKEP52429 567 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 CHN2P52757 468 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 LOXL3P58215 753 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 PIGFQ07326 219 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 NBPF8Q3BBV2 869 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 C1QL3Q5VWW1 255 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 ABLIM2Q6H8Q1 611 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 TAPT1Q6NXT6 567 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 TAF2Q6P1X5 1199 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 MED25Q71SY5 747 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 TBC1D1Q86TI0 1168 aaPredicted RBP5.95□□□□□ -1.46
RFC1-216ENST00000514572 C2CD5Q86YS7 1000 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 PCYOX1LQ8NBM8 494 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 THOC2Q8NI27 1593 aaKnown RBP5.95□□□□□ -1.46
RFC1-216ENST00000514572 BPIFB1Q8TDL5 484 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 ZDHHC12Q96GR4 267 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 CPPED1Q9BRF8 314 aaPredicted RBP5.95□□□□□ -1.46
RFC1-216ENST00000514572 TRIM5Q9C035 493 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 INO80BQ9C086 356 aaPredicted RBP5.95□□□□□ -1.46
RFC1-216ENST00000514572 EPC1Q9H2F5 836 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 ALG13Q9NP73 1137 aaKnown RBP5.95□□□□□ -1.46
RFC1-216ENST00000514572 CTTNBP2NLQ9P2B4 639 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 HPSEQ9Y251 543 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 ITIH6Q6UXX5 1313 aa5.95□□□□□ -1.46
RFC1-216ENST00000514572 SETD1BQ9UPS6 1966 aaKnown RBP5.95□□□□□ -1.46
RFC1-216ENST00000514572 PDS5BQ9NTI5 1447 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 DNPH1O43598 174 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 NOBOXO60393 691 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 B4GALT4O60513 344 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 BAIAP3O94812 1187 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 PRKCBP05771 671 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 ANXA6P08133 673 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 LRPAP1P30533 357 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 TUBP50607 506 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 PAPOLAP51003 745 aaKnown RBP5.94□□□□□ -1.46
RFC1-216ENST00000514572 AFF3P51826 1226 aaKnown RBP5.94□□□□□ -1.46
RFC1-216ENST00000514572 LILRA4P59901 499 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 VAMP2P63027 116 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 SCAPQ12770 1279 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 CUL4BQ13620 913 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 FHL3Q13643 280 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 MGAT5BQ3V5L5 792 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 DCAF17Q5H9S7 520 aaPredicted RBP5.94□□□□□ -1.46
RFC1-216ENST00000514572 FAM102AQ5T9C2 384 aaPredicted RBP5.94□□□□□ -1.46
RFC1-216ENST00000514572 TTC22Q5TAA0 569 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 AGAP9Q5VTM2 703 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 ATG14Q6ZNE5 492 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 SMCR8Q8TEV9 937 aaPredicted RBP5.94□□□□□ -1.46
RFC1-216ENST00000514572 ST8SIA2Q92186 375 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 HTRA1Q92743 480 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 MAELQ96JY0 434 aaKnown RBP5.94□□□□□ -1.46
RFC1-216ENST00000514572 TRIB1Q96RU8 372 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 SMOQ99835 787 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 PLA2G12BQ9BX93 195 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 SLC26A6Q9BXS9 759 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 TTYH3Q9C0H2 523 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 G6PC2Q9NQR9 355 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 ZSCAN32Q9NX65 697 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 HSFX1Q9UBD0 423 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 NRBP1Q9UHY1 535 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 DAPP1Q9UN19 280 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 SMG5Q9UPR3 1016 aaKnown RBP5.94□□□□□ -1.46
RFC1-216ENST00000514572 CDYLQ9Y232 598 aa5.94□□□□□ -1.46
RFC1-216ENST00000514572 CCDC78A2IDD5 438 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 HMX3A6NHT5 357 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 A6NLC8 198 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 H0Y3Z8 333 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 RFXAPO00287 272 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 CD3EAPO15446 510 aaKnown RBP5.93□□□□□ -1.46
RFC1-216ENST00000514572 CDC14BO60729 498 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 COQ9O75208 318 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 VPS4BO75351 444 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 PIAS2O75928 621 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 USP1O94782 785 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 GNAT2P19087 354 aa5.93□□□□□ -1.46
RFC1-216ENST00000514572 KLRK1P26718 216 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms