RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 WDR44Q5JSH3 913 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 TXNDC11Q6PKC3 985 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 KRBA2Q6ZNG9 492 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 MON1AQ86VX9 555 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 RALGPS2Q86X27 583 aaPredicted RBP11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 SCN4BQ8IWT1 228 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 RIN3Q8TB24 985 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 PCED1BQ96HM7 432 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 FAM83CQ9BQN1 747 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 SNX25Q9H3E2 840 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 DPEP3Q9H4B8 488 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 TDP1Q9NUW8 608 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 THG1LQ9NWX6 298 aaKnown RBP11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 GTSE1Q9NYZ3 720 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 TRAF3IP3Q9Y228 551 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 ZNF292O60281 2723 aa11.17□□□□□ -0.62
HMGXB3-205ENST00000514469 TRIM66O15016 1216 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 MAPK13O15264 365 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 KIF20AO95235 890 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 VNN1O95497 513 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 C4BPAP04003 597 aaKnown RBP11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 DLG4P78352 724 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 CYP27A1Q02318 531 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 CSTF1Q05048 431 aaKnown RBP11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 TNK2Q07912 1038 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 USP4Q13107 963 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 BIRC3Q13489 604 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 NCOA4Q13772 614 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 LRRC32Q14392 662 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 KCNB1Q14721 858 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 ZNF77Q15935 545 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 NFIL3Q16649 462 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 ZNF699Q32M78 642 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 ITPRIPL2Q3MIP1 535 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 ADSSL1Q8N142 457 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 ZBTB44Q8NCP5 570 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 OR6B3Q8NGW1 331 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 C8orf48Q96LL4 319 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 TTLL2Q9BWV7 592 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 SMYD3Q9H7B4 428 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 LMAN1LQ9HAT1 526 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 HPS4Q9NQG7 708 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 NXF1Q9UBU9 619 aaKnown RBP11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 PCDHGA2Q9Y5H1 932 aa11.16□□□□□ -0.62
HMGXB3-205ENST00000514469 PTPRDP23468 1912 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 TRAV19A0A0A6YYK7 116 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 A8MXQ7 604 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 CALUO43852 315 aaPredicted RBP11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 KINO60870 393 aaKnown RBP11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 LILRB5O75023 590 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 PHACTR2O75167 634 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 PTPN1P18031 435 aaKnown RBP11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 ANXA13P27216 316 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 GRIK1P39086 918 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 CACNA2D1P54289 1103 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 USP46P62068 366 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 NOP14P78316 857 aaKnown RBP11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 FAM160A1Q05DH4 1040 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 CCINQ13939 588 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 GAS6Q14393 721 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 ZACNQ401N2 412 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 C1orf220Q5T0J3 134 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 TSSK4Q6SA08 328 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 DENND5BQ6ZUT9 1274 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 SUMF1Q8NBK3 374 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 B3GALNT2Q8NCR0 500 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 TTC8Q8TAM2 541 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 CCDC47Q96A33 483 aaKnown RBP11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 CHFRQ96EP1 664 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 SLC22A12Q96S37 553 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 FAM126AQ9BYI3 521 aaPredicted RBP11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 ZNF518BQ9C0D4 1074 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 ELOVL4Q9GZR5 314 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 GDPD2Q9HCC8 539 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 TRPC7Q9HCX4 862 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 TMEM30AQ9NV96 361 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 ZSCAN32Q9NX65 697 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 GCNT4Q9P109 453 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 DENND4CQ5VZ89 1909 aa11.15□□□□□ -0.62
HMGXB3-205ENST00000514469 FANCMQ8IYD8 2048 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 C2orf78A6NCI8 922 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 OTOL1A6NHN0 477 aaPredicted RBP11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 F8VP50 259 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 IKBKBO14920 756 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 AKAP3O75969 853 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 ZNF202O95125 648 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 PAPSS2O95340 614 aaPredicted RBP11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 CKMP06732 381 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 USP17L7P0C7H9 530 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 TCF3P15923 654 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 PFKLP17858 780 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 RAP1GAPP47736 663 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 CCR3P51677 355 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 CDH8P55286 799 aa11.14□□□□□ -0.63
HMGXB3-205ENST00000514469 ENPEPQ07075 957 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms