RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 C1orf112Q9NSG2 853 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 GRID1Q9ULK0 1009 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 FAM200BP0CF97 657 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 GPC3P51654 580 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 FMO1Q01740 532 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 TRIP10Q15642 601 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 WDR44Q5JSH3 913 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 DCAF15Q66K64 600 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 SV2AQ7L0J3 742 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 PRPF39Q86UA1 669 aaKnown RBP10.1□□□□□ -0.79
VCAN-210ENST00000513960 VSIG10LQ86VR7 867 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 ARHGAP18Q8N392 663 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 NME8Q8N427 588 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 CFAP36Q96G28 342 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 FAM213AQ9BRX8 229 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 PREBQ9HCU5 417 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 PIM2Q9P1W9 311 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 ABLIM1O14639 778 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 SORBS3O60504 671 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 DGAT1O75907 488 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 LIG4P49917 911 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 CCNG1P51959 295 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 AP1B1Q10567 949 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 ASPHQ12797 758 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 TCEAL1Q15170 157 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 MMEL1Q495T6 779 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 RABGAP1LQ5R372 815 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 OR52E8Q6IFG1 317 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 APLFQ8IW19 511 aaPredicted RBP10.1□□□□□ -0.79
VCAN-210ENST00000513960 SCUBE1Q8IWY4 988 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 GLIS1Q8NBF1 620 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 RSAD2Q8WXG1 361 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 ITFG2Q969R8 447 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 TUBB6Q9BUF5 446 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 DMAP1Q9NPF5 467 aaPredicted RBP10.1□□□□□ -0.79
VCAN-210ENST00000513960 ETNK2Q9NVF9 386 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 DNPEPQ9ULA0 475 aa10.1□□□□□ -0.79
VCAN-210ENST00000513960 H0YCG3 227 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 C2CD2LO14523 706 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 TNNI1P19237 187 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 ATXN3P54252 364 aaPredicted RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 USP46P62068 366 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 CYP24A1Q07973 514 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 HIF1AQ16665 826 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 ENDOVQ8N8Q3 282 aaKnown RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 RAB3IL1Q8TBN0 382 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 CDHR1Q96JP9 859 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 TMEM121Q9BTD3 319 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 ASCC2Q9H1I8 757 aaPredicted RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 TAS2R1Q9NYW7 299 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 COQ4Q9Y3A0 265 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 ZNF711Q9Y462 761 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 RIPK3Q9Y572 518 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 FSCN2O14926 492 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 TLR3O15455 904 aaKnown RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 TOM1L1O75674 476 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 TPP2P29144 1249 aaPredicted RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 GTF2H1P32780 548 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 ARL4CP56559 192 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 MOGSQ13724 837 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 BRDTQ58F21 947 aaPredicted RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 FOXB2Q5VYV0 432 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 ACAD10Q6JQN1 1059 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 RIPOR1Q6ZS17 1223 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 ENOSF1Q7L5Y1 443 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 POU5F2Q8N7G0 328 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 HELQQ8TDG4 1101 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 PRPF31Q8WWY3 499 aaKnown RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 DTNBP1Q96EV8 351 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 FAM81BQ96LP2 452 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 TEPSINQ96N21 525 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 TTC25Q96NG3 672 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 OLFM3Q96PB7 478 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 CAMKK2Q96RR4 588 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 PAFAH2Q99487 392 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 LMCD1Q9NZU5 365 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 GJA3Q9Y6H8 435 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 PDE5AO76074 875 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 MTA2O94776 668 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 ANPEPP15144 967 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 DESP17661 470 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 BACE1P56817 501 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 RHOT1Q8IXI2 618 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 BSNDQ8WZ55 320 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 USP6NLQ92738 828 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 NTPCRQ9BSD7 190 aaKnown RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 NMUR2Q9GZQ4 415 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 JPH1Q9HDC5 661 aaPredicted RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 SENP1Q9P0U3 644 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 SAE1Q9UBE0 346 aaPredicted RBP10.09□□□□□ -0.79
VCAN-210ENST00000513960 ASB3Q9Y575 518 aa10.09□□□□□ -0.79
VCAN-210ENST00000513960 COPEO14579 308 aa10.08□□□□□ -0.8
VCAN-210ENST00000513960 CYP1A2P05177 515 aa10.08□□□□□ -0.8
VCAN-210ENST00000513960 SIX1Q15475 284 aaPredicted RBP10.08□□□□□ -0.8
VCAN-210ENST00000513960 SLC5A9Q2M3M2 681 aa10.08□□□□□ -0.8
VCAN-210ENST00000513960 MTERF2Q49AM1 385 aa10.08□□□□□ -0.8
VCAN-210ENST00000513960 LPCAT4Q643R3 524 aa10.08□□□□□ -0.8
VCAN-210ENST00000513960 SYDE1Q6ZW31 735 aaPredicted RBP10.08□□□□□ -0.8
VCAN-210ENST00000513960 SAMD7Q7Z3H4 446 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms