RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 NFE2Q16621 373 aaPredicted RBP12.02□□□□□ -0.49
HTT-213ENST00000513806 UVSSAQ2YD98 709 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 LIN9Q5TKA1 542 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 DENND1BQ6P3S1 775 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 GPRIN1Q7Z2K8 1008 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 NOP9Q86U38 636 aaKnown RBP12.02□□□□□ -0.49
HTT-213ENST00000513806 TTC30AQ86WT1 665 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 TCEAL8Q8IYN2 117 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 FAM71AQ8IYT1 594 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 ZMIZ2Q8NF64 920 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 SPPL2BQ8TCT7 592 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 CASP10Q92851 521 aa12.02□□□□□ -0.49
HTT-213ENST00000513806 PABPC5Q96DU9 382 aaKnown RBP12.02□□□□□ -0.49
HTT-213ENST00000513806 OXCT2Q9BYC2 517 aaPredicted RBP12.02□□□□□ -0.49
HTT-213ENST00000513806 UBE2ZQ9H832 354 aaPredicted RBP12.02□□□□□ -0.49
HTT-213ENST00000513806 DOCK8Q8NF50 2099 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 M0QYV0 167 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 O00370 1275 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 ADCY5O95622 1261 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 PAEPP09466 180 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 SKILP12757 684 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 CASP14P31944 242 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 STAT1P42224 750 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 RGS7P49802 495 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 USP46P62068 366 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 TMEM184AQ6ZMB5 413 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 C4orf50Q6ZRC1 276 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 CLEC20AQ6ZU45 233 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 ZNF606Q8WXB4 792 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 ZNF707Q96C28 371 aaPredicted RBP12.01□□□□□ -0.49
HTT-213ENST00000513806 MSLNLQ96KJ4 702 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 HNRNPABQ99729 332 aaKnown RBP12.01□□□□□ -0.49
HTT-213ENST00000513806 GRPEL1Q9HAV7 217 aa12.01□□□□□ -0.49
HTT-213ENST00000513806 ZNF334Q9HCZ1 680 aaPredicted RBP12.01□□□□□ -0.49
HTT-213ENST00000513806 MAGED2Q9UNF1 606 aaPredicted RBP12.01□□□□□ -0.49
HTT-213ENST00000513806 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12□□□□□ -0.49
HTT-213ENST00000513806 FSD2A1L4K1 749 aa12□□□□□ -0.49
HTT-213ENST00000513806 GOLGA6L3A6NEY3 463 aa12□□□□□ -0.49
HTT-213ENST00000513806 GRXCR2A6NFK2 248 aa12□□□□□ -0.49
HTT-213ENST00000513806 LRG1P02750 347 aa12□□□□□ -0.49
HTT-213ENST00000513806 TPM3P06753 285 aa12□□□□□ -0.49
HTT-213ENST00000513806 MMEP08473 750 aa12□□□□□ -0.49
HTT-213ENST00000513806 FAM200BP0CF97 657 aa12□□□□□ -0.49
HTT-213ENST00000513806 CYP11B1P15538 503 aa12□□□□□ -0.49
HTT-213ENST00000513806 GJA1P17302 382 aa12□□□□□ -0.49
HTT-213ENST00000513806 CHRNB2P17787 502 aa12□□□□□ -0.49
HTT-213ENST00000513806 RFX1P22670 979 aa12□□□□□ -0.49
HTT-213ENST00000513806 SP100P23497 879 aaPredicted RBP12□□□□□ -0.49
HTT-213ENST00000513806 ADKP55263 362 aaKnown RBP12□□□□□ -0.49
HTT-213ENST00000513806 PDE4CQ08493 712 aa12□□□□□ -0.49
HTT-213ENST00000513806 PLD1Q13393 1074 aa12□□□□□ -0.49
HTT-213ENST00000513806 COL19A1Q14993 1142 aa12□□□□□ -0.49
HTT-213ENST00000513806 MAPRE1Q15691 268 aaKnown RBP12□□□□□ -0.49
HTT-213ENST00000513806 CFAP221Q4G0U5 840 aa12□□□□□ -0.49
HTT-213ENST00000513806 ARHGAP17Q68EM7 881 aa12□□□□□ -0.49
HTT-213ENST00000513806 SPECC1LQ69YQ0 1117 aa12□□□□□ -0.49
HTT-213ENST00000513806 GRASPQ7Z6J2 395 aaPredicted RBP12□□□□□ -0.49
HTT-213ENST00000513806 DNAAF5Q86Y56 855 aa12□□□□□ -0.49
HTT-213ENST00000513806 TTC39CQ8N584 583 aa12□□□□□ -0.49
HTT-213ENST00000513806 SPC24Q8NBT2 197 aa12□□□□□ -0.49
HTT-213ENST00000513806 ST13P5Q8NFI4 369 aaPredicted RBP12□□□□□ -0.49
HTT-213ENST00000513806 C2orf15Q8WU43 125 aaKnown RBP12□□□□□ -0.49
HTT-213ENST00000513806 SMG7Q92540 1137 aaKnown RBP12□□□□□ -0.49
HTT-213ENST00000513806 SECISBP2LQ93073 1101 aaKnown RBP12□□□□□ -0.49
HTT-213ENST00000513806 SMARCD1Q96GM5 515 aa12□□□□□ -0.49
HTT-213ENST00000513806 FAM81BQ96LP2 452 aa12□□□□□ -0.49
HTT-213ENST00000513806 S1PR5Q9H228 398 aa12□□□□□ -0.49
HTT-213ENST00000513806 PLEKHA4Q9H4M7 779 aa12□□□□□ -0.49
HTT-213ENST00000513806 CYTH4Q9UIA0 394 aa12□□□□□ -0.49
HTT-213ENST00000513806 WDR3Q9UNX4 943 aaKnown RBP eCLIP12□□□□□ -0.49
HTT-213ENST00000513806 ITIH6Q6UXX5 1313 aa12□□□□□ -0.49
HTT-213ENST00000513806 SLC38A8A6NNN8 435 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 HHLA1C9JL84 531 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 GABBR2O75899 941 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 PLEKP08567 350 aaPredicted RBP11.99□□□□□ -0.49
HTT-213ENST00000513806 NPR3P17342 541 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 ALDH1A3P47895 512 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 PTK2Q05397 1052 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 TBX2Q13207 712 aaPredicted RBP11.99□□□□□ -0.49
HTT-213ENST00000513806 ASIC2Q16515 512 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 CCDC149Q6ZUS6 474 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 IRF2BP2Q7Z5L9 587 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 SCAMP5Q8TAC9 235 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 EPS8L1Q8TE68 723 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 ING5Q8WYH8 240 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 DDX1Q92499 740 aaKnown RBP11.99□□□□□ -0.49
HTT-213ENST00000513806 NDRG1Q92597 394 aaKnown RBP11.99□□□□□ -0.49
HTT-213ENST00000513806 HLA-CQ95604 372 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 TCEAL4Q96EI5 215 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 FUBP3Q96I24 572 aaKnown RBP eCLIP11.99□□□□□ -0.49
HTT-213ENST00000513806 CORO1BQ9BR76 489 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 DUSP16Q9BY84 665 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 PRKD2Q9BZL6 878 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 SFXN1Q9H9B4 322 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 PIDD1Q9HB75 910 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 DZANK1Q9NVP4 752 aa11.99□□□□□ -0.49
HTT-213ENST00000513806 DNMT3BQ9UBC3 853 aaKnown RBP11.99□□□□□ -0.49
HTT-213ENST00000513806 TJP2Q9UDY2 1190 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms