RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 GLE1Q53GS7 698 aaKnown RBP10.45□□□□□ -0.74
TPM3-221ENST00000513769 NAA35Q5VZE5 725 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 DESI1Q6ICB0 168 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 RSRC2Q7L4I2 434 aaKnown RBP10.45□□□□□ -0.74
TPM3-221ENST00000513769 TMEM110Q86TL2 294 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 METTL23Q86XA0 190 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 RASGEF1CQ8N431 466 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 C3orf20Q8ND61 904 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 C1orf131Q8NDD1 294 aaKnown RBP10.45□□□□□ -0.74
TPM3-221ENST00000513769 OR6B3Q8NGW1 331 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.45□□□□□ -0.74
TPM3-221ENST00000513769 ZNF564Q8TBZ8 553 aaPredicted RBP10.45□□□□□ -0.74
TPM3-221ENST00000513769 URGCPQ8TCY9 931 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 SLC35F5Q8WV83 523 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 TFAP2BQ92481 460 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 ZNF653Q96CK0 615 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 FAM84AQ96KN4 292 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 HSFY1Q96LI6 401 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 ACBD6Q9BR61 282 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 NUP85Q9BW27 656 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 CARD6Q9BX69 1037 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 OXCT2Q9BYC2 517 aaPredicted RBP10.45□□□□□ -0.74
TPM3-221ENST00000513769 ELOVL4Q9GZR5 314 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 CARD9Q9H257 536 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 OSGEPQ9NPF4 335 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 HESX1Q9UBX0 185 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 TUBGCP4Q9UGJ1 667 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 IP6K2Q9UHH9 426 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 PCDHA3Q9Y5H8 950 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 NR2E3Q9Y5X4 410 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 TMEM191CA6NGB0 347 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 M0QZQ0 153 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 PODXLO00592 558 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 SPTLC1O15269 473 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 EFCAB14O75071 495 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 TYMPP19971 482 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 RRM1P23921 792 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 MCM3P25205 808 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 SCNN1AP37088 669 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 MLH1P40692 756 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 SH3BP2P78314 561 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 SOX4Q06945 474 aaPredicted RBP10.44□□□□□ -0.74
TPM3-221ENST00000513769 FAAP100Q0VG06 881 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 MBTPS1Q14703 1052 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 MAPRE1Q15691 268 aaKnown RBP10.44□□□□□ -0.74
TPM3-221ENST00000513769 LINC01559Q495D7 138 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 NOMO2Q5JPE7 1267 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 GLRA4Q5JXX5 417 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 CCDC181Q5TID7 509 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 LRRC38Q5VT99 294 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 CCDC70Q6NSX1 233 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 THEM5Q8N1Q8 247 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 GOLGA1Q92805 767 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 ELMO3Q96BJ8 720 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 ARHGEF26Q96DR7 871 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 SENP8Q96LD8 212 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 ZFP42Q96MM3 310 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 HNRNPABQ99729 332 aaKnown RBP10.44□□□□□ -0.74
TPM3-221ENST00000513769 ZSWIM1Q9BR11 485 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 CXCL16Q9H2A7 254 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 SMYD3Q9H7B4 428 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 CDH9Q9ULB4 789 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 COG5Q9UP83 839 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 RALGAPA2Q2PPJ7 1873 aa10.44□□□□□ -0.74
TPM3-221ENST00000513769 TRIP11Q15643 1979 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 UQCRHLA0A096LP55 91 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 TCRBV5S1A1TA0A578 114 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 CCDC188H7C350 402 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 NBNO60934 754 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 MICAL2O94851 1124 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 UQCRHP07919 91 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 KRT3P12035 628 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 PTPN1P18031 435 aaKnown RBP10.43□□□□□ -0.74
TPM3-221ENST00000513769 BRD2P25440 801 aaKnown RBP10.43□□□□□ -0.74
TPM3-221ENST00000513769 CTNNA2P26232 953 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 PCSK1P29120 753 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 PEX5P50542 639 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 CLCNKBP51801 687 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 GUCY2FP51841 1108 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 PLCB3Q01970 1234 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 DSC1Q08554 894 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 IKBKEQ14164 716 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 GPNMBQ14956 572 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 DSTYKQ6XUX3 929 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 PDCL2Q8N4E4 241 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 MMGT1Q8N4V1 131 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 NIPA2Q8N8Q9 360 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 DBF4BQ8NFT6 615 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 KBTBD7Q8WVZ9 684 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 MAIP1Q8WWC4 291 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 KCTD13Q8WZ19 329 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 RUBCNQ92622 972 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 CD101Q93033 1021 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 MCRS1Q96EZ8 462 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 FAM193BQ96PV7 902 aaPredicted RBP10.43□□□□□ -0.74
TPM3-221ENST00000513769 MRPL45Q9BRJ2 306 aaKnown RBP10.43□□□□□ -0.74
TPM3-221ENST00000513769 HIPK3Q9H422 1215 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 SLC24A3Q9HC58 644 aa10.43□□□□□ -0.74
TPM3-221ENST00000513769 TRIOBPQ9H2D6 2365 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 ABHD14A-ACY1A0A1B0GW23 586 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms