RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 SHOC2Q9UQ13 582 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 NOD1Q9Y239 953 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 MST1RQ04912 1400 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 SMAPO00193 183 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 DDX3YO15523 660 aaKnown RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 NR3C2P08235 984 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 ATP6V1C1P21283 382 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 GSTT1P30711 240 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 ATP13A4Q4VNC1 1196 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 OTOP1Q7RTM1 612 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 SPOCK2Q92563 424 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 PPP2R3CQ969Q6 453 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 SGF29Q96ES7 293 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 SRPK1Q96SB4 655 aaKnown RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 ZCWPW1Q9H0M4 648 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 IL1RAPL1Q9NZN1 696 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 SNX5Q9Y5X3 404 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 IFT172Q9UG01 1749 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 KBTBD13C9JR72 458 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 MGRN1O60291 552 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 FKBP6O75344 327 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 CREB1P16220 341 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 STMN1P16949 149 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 VCAM1P19320 739 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 STIP1P31948 543 aaKnown RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 NLRP11P59045 1033 aaKnown RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 KIF12Q96FN5 646 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 MTMR12Q9C0I1 747 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 CDYLQ9Y232 598 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 CHEK2O96017 543 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SLURP2P0DP57 97 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 GPD1P21695 349 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 TBL3Q12788 808 aaKnown RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 R3HDM1Q15032 1099 aaKnown RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 OASLQ15646 514 aaKnown RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 TKFCQ3LXA3 575 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 COBLL1Q53SF7 1204 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 EFHC2Q5JST6 749 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 RNF148Q8N7C7 305 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 LRRC57Q8N9N7 239 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 OR6P1Q8NGX9 317 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 ZNF669Q96BR6 464 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SLC4A9Q96Q91 983 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 FBXO6Q9NRD1 293 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 V9GYQ6 96 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 KCNA4P22459 653 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SHMT1P34896 483 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SLC44A4Q53GD3 710 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 ARSHQ5FYA8 562 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 IL31Q6EBC2 164 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 DENND5BQ6ZUT9 1274 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 CATSPER4Q7RTX7 472 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 ECHDC2Q86YB7 292 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 HACE1Q8IYU2 909 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 FAM13CQ8NE31 585 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 USP13Q92995 863 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SLC39A10Q9ULF5 831 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 KDM1AO60341 852 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 OATP04181 439 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 ETS2P15036 469 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 MTHFD1LQ6UB35 978 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 USP33Q8TEY7 942 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 GFM2Q969S9 779 aaKnown RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SIK2Q9H0K1 926 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 ZNF212Q9UDV6 495 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 FBXO40Q9UH90 709 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SLC12A6Q9UHW9 1150 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 DDTLA6NHG4 134 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SPRP35270 261 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 PHKA2P46019 1235 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 STAT5BP51692 787 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 BNIP1Q12981 228 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 MTMR2Q13614 643 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 MAPRE2Q15555 327 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 PDPK2PQ6A1A2 396 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 PALB2Q86YC2 1186 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 ABRAQ8N0Z2 381 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 ZNF786Q8N393 782 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 MAGEC3Q8TD91 643 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 LRRC19Q9H756 370 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 DDX4Q9NQI0 724 aaKnown RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 ANKEF1Q9NU02 776 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 PIH1D1Q9NWS0 290 aaKnown RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SNX9Q9Y5X1 595 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 A0A1W2PPM1 405 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 AHCYL1O43865 530 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 S100BP04271 92 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 RAG1P15918 1043 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 MCL1Q07820 350 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 GRM1Q13255 1194 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 RIPK1Q13546 671 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 PDK4Q16654 411 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 LRRC71Q8N4P6 559 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 APOPT1Q96IL0 206 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 FAM167AQ96KS9 214 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 KCNMB3Q9NPA1 279 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 NMRK1Q9NWW6 199 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 TSR3Q9UJK0 312 aaKnown RBP8.06□□□□□ -1.12
CLCN3-209ENST00000513761 SOX13Q9UN79 622 aa8.06□□□□□ -1.12
CLCN3-209ENST00000513761 EME2A4GXA9 379 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms