RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 RNF40O75150 1001 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 CKMP06732 381 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 ADRB1P08588 477 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 PDGFRBP09619 1106 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 DRD1P21728 446 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 HOXD13P35453 343 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 MAGEA11P43364 429 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 PSMC1P62191 440 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 ST3GAL2Q16842 350 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 NAIF1Q69YI7 327 aaPredicted RBP14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 C4orf50Q6ZRC1 276 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 LIMS2Q7Z4I7 341 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 ARL14EPQ8N8R7 260 aaPredicted RBP14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 FSIP1Q8NA03 581 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 RDH13Q8NBN7 331 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 OSCP1Q8WVF1 389 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 KBTBD7Q8WVZ9 684 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 P2RY13Q9BPV8 354 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 SYT15Q9BQS2 421 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 TNMDQ9H2S6 317 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 KBTBD4Q9NVX7 518 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 DUS2Q9NX74 493 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 HSPBP1Q9NZL4 362 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 GCNT4Q9P109 453 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 CDH9Q9ULB4 789 aa14.33□□□□□ -0.12
POLR2J3-217ENST00000513438 CCDC163A0A0D9SF12 145 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 C2orf78A6NCI8 922 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 CST3P01034 146 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 HDCP19113 662 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 BDNFP23560 247 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 GRIK1P39086 918 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 IFNAR2P48551 515 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 AMPD3Q01432 767 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 ZNF77Q15935 545 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 E2F4Q16254 413 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 TRAPPC11Q7Z392 1133 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 CPA6Q8N4T0 437 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 ZNF507Q8TCN5 953 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 GAB3Q8WWW8 586 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 MYLPFQ96A32 169 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 EXOC4Q96A65 974 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 MMS19Q96T76 1030 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 TRIM9Q9C026 710 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 ARRDC1-AS1Q9H2J1 176 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 LINC00597Q9H2U6 94 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 KIAA1586Q9HCI6 787 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 CRTAC1Q9NQ79 661 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 WNT6Q9Y6F9 365 aa14.32□□□□□ -0.12
POLR2J3-217ENST00000513438 ANAPC1Q9H1A4 1944 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 CLIC2O15247 247 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 TGFB1I1O43294 461 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 PPP6R2O75170 966 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 RPP40O75818 363 aaKnown RBP14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 CCDC192P0DO97 292 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 WARSP23381 471 aaKnown RBP14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 ASIC1P78348 528 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 CYP27A1Q02318 531 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 NR1H3Q13133 447 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 EML3Q32P44 896 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 FBXO43Q4G163 708 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 VSTM1Q6UX27 236 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 EPM2AIP1Q7L775 607 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 CACNA2D4Q7Z3S7 1137 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 KBTBD6Q86V97 674 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 WDR49Q8IV35 697 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 CAMKK1Q8N5S9 505 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 SH3RF2Q8TEC5 729 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 CD101Q93033 1021 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 DHX58Q96C10 678 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 SPATA17Q96L03 361 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 CUEDC2Q9H467 287 aa14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 KMT2BQ9UMN6 2715 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-217ENST00000513438 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 EIF3DO15371 548 aaKnown RBP eCLIP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 FOXD2O60548 495 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 DLATP10515 647 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 TNNI1P19237 187 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 GNL1P36915 607 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 RAP1GAPP47736 663 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 USP46P62068 366 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 USP4Q13107 963 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 PSMD2Q13200 908 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 KCNB1Q14721 858 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 SF3A2Q15428 464 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 MAPRE1Q15691 268 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 CCDC6Q16204 474 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 SNRNP35Q16560 246 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 FAM26FQ5R3K3 315 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 IL31Q6EBC2 164 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 DENND5BQ6ZUT9 1274 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 IQUBQ8NA54 791 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 RPLP0P6Q8NHW5 317 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 EZH1Q92800 747 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 ATP2A3Q93084 1043 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 PCED1BQ96HM7 432 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 LOXL4Q96JB6 756 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 MRPL45Q9BRJ2 306 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 SNX25Q9H3E2 840 aa14.3□□□□□ -0.12
POLR2J3-217ENST00000513438 TRPM5Q9NZQ8 1165 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms