RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TAPT1Q6NXT6 567 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 VRK3Q8IV63 474 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 SPICE1Q8N0Z3 855 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 OR14K1Q8NGZ2 314 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 SH3RF2Q8TEC5 729 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 RIPOR3Q96MK2 946 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 SLF1Q9BQI6 1058 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 MTG1Q9BT17 334 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 VTA1Q9NP79 307 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 SMC4Q9NTJ3 1288 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 TRMT13Q9NUP7 481 aaKnown RBP4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 FBXO28Q9NVF7 368 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 ACTR10Q9NZ32 417 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 PA2G4Q9UQ80 394 aaKnown RBP4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 VWA7Q9Y334 891 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 RIPK3Q9Y572 518 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 COL4A4P53420 1690 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 PTPRSQ13332 1948 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 MCM3APO60318 1980 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 WDR87Q6ZQQ6 2873 aa4.34□□□□□ -1.72
PDLIM5-218ENST00000513341 C5orf42Q9H799 3197 aa4.34□□□□□ -1.72
PDLIM5-218ENST00000513341 DCHS1Q96JQ0 3298 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 TPRP12270 2363 aaKnown RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 FAM47E-STBD1D6RA91 191 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 C5orf67F2Z3F1 127 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 F5H6K3 240 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 GNAI3P08754 354 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 EEF2P13639 858 aaKnown RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 PTPN1P18031 435 aaKnown RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 ICAM3P32942 547 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 GTF2F1P35269 517 aaKnown RBP eCLIP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 GPR85P60893 370 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 PSMC6P62333 389 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 KLRC3Q07444 240 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 GPNMBQ14956 572 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 FXNQ16595 210 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 TKFCQ3LXA3 575 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 ALDH1L2Q3SY69 923 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 RABL3Q5HYI8 236 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 TTC39AQ5SRH9 613 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 OLFML1Q6UWY5 402 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 C6orf15Q6UXA7 325 aaPredicted RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 GAREM2Q75VX8 874 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 DGLUCYQ7Z3D6 616 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 SESTD1Q86VW0 696 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 RPAP2Q8IXW5 612 aaPredicted RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 GSPT2Q8IYD1 628 aaKnown RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 ADSSL1Q8N142 457 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 MORC4Q8TE76 937 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 PPP2R3CQ969Q6 453 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 RIOK1Q9BRS2 568 aaKnown RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 C17orf80Q9BSJ5 609 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 CRNKL1Q9BZJ0 848 aaKnown RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 SLC38A10Q9HBR0 1119 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 MCM9Q9NXL9 1143 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 CD207Q9UJ71 328 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 MTUS1Q9ULD2 1270 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 SYNPO2Q9UMS6 1093 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 CTDP1Q9Y5B0 961 aaPredicted RBP4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 SCN10AQ9Y5Y9 1956 aa4.33□□□□□ -1.72
PDLIM5-218ENST00000513341 ACACBO00763 2458 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 PKD1L2Q7Z442 2459 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 EMSYQ7Z589 1322 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 RAD50Q92878 1312 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 A0A1W2PRX2 142 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 TCRBV5S4A2TA0A5A2 114 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 MED19A0JLT2 244 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 FSD2A1L4K1 749 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 FAM90A27PA6NNH2 459 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 SMAD7O15105 426 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 B3GALT2O43825 422 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 DLX3O60479 287 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 IDH1O75874 414 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 SOD2P04179 222 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 ATF7P17544 494 aaPredicted RBP4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 ETFBP38117 255 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 ADCY8P40145 1251 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 CLCN5P51795 746 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 VCPP55072 806 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 DEFB103AP81534 67 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 COASYQ13057 564 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 DDX10Q13206 875 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 PTGISQ16647 500 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 FAM47CQ5HY64 1035 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 FAM83BQ5T0W9 1011 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 LRRC55Q6ZSA7 311 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 EP400NLQ6ZTU2 488 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 RPAINQ86UA6 219 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 UBALD2Q8IYN6 164 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 CPXCR1Q8N123 301 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 ZNF276Q8N554 614 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 MIGA1Q8NAN2 632 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 TOP1MTQ969P6 601 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 MKL1Q969V6 931 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 MSLNLQ96KJ4 702 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 KCNJ15Q99712 375 aa4.32□□□□□ -1.72
PDLIM5-218ENST00000513341 PHF7Q9BWX1 381 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms