RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 PRPF4BQ13523 1007 aaKnown RBP7.56□□□□□ -1.2
RFC1-215ENST00000512881 RABEP1Q15276 862 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 MAPK6Q16659 721 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 HAUS3Q68CZ6 603 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 KIAA1841Q6NSI8 718 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 GPR149Q86SP6 731 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 RNF168Q8IYW5 571 aaPredicted RBP7.56□□□□□ -1.2
RFC1-215ENST00000512881 ZDHHC14Q8IZN3 488 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 MFSD4AQ8N468 514 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 DEPTORQ8TB45 409 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 FEZF2Q8TBJ5 459 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 RABGGTAQ92696 567 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 IFT74Q96LB3 600 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 GPR62Q9BZJ7 368 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 BHMT2Q9H2M3 363 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 PDZD7Q9H5P4 517 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 SFXN1Q9H9B4 322 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 RXFP1Q9HBX9 757 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 CHST7Q9NS84 486 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 SNTG2Q9NY99 539 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 PCDHB6Q9Y5E3 794 aa7.56□□□□□ -1.2
RFC1-215ENST00000512881 TADA2AO75478 443 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 CST3P01034 146 aaPredicted RBP7.55□□□□□ -1.2
RFC1-215ENST00000512881 PRKCBP05771 671 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 SPATA31D3P0C874 917 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 MYBP10242 640 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 PDIA4P13667 645 aaKnown RBP7.55□□□□□ -1.2
RFC1-215ENST00000512881 NAMPTP43490 491 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 ST13P50502 369 aaKnown RBP7.55□□□□□ -1.2
RFC1-215ENST00000512881 EFNA5P52803 228 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 GRIK3Q13003 919 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 PSMD2Q13200 908 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 PPP2R5AQ15172 486 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 IL17AQ16552 155 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 USP41Q3LFD5 358 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 NT5DC1Q5TFE4 455 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 LETMD1Q6P1Q0 360 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 SPATA31D4Q6ZUB0 917 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 PALB2Q86YC2 1186 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 SUGP1Q8IWZ8 645 aaKnown RBP7.55□□□□□ -1.2
RFC1-215ENST00000512881 UBALD2Q8IYN6 164 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 IGSF22Q8N9C0 903 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 TDRD5Q8NAT2 981 aaKnown RBP7.55□□□□□ -1.2
RFC1-215ENST00000512881 CMASQ8NFW8 434 aaPredicted RBP7.55□□□□□ -1.2
RFC1-215ENST00000512881 RIN3Q8TB24 985 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 FAM168AQ92567 244 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 KIFAP3Q92845 792 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 B3GALT6Q96L58 329 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 KIFC3Q9BVG8 833 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 RAB34Q9BZG1 259 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 CCDC113Q9H0I3 377 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 MIR1-1HGQ9H1L0 117 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 CXCL16Q9H2A7 254 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 MAN1C1Q9NR34 630 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 SEMA3GQ9NS98 782 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 DDX19AQ9NUU7 478 aaKnown RBP7.55□□□□□ -1.2
RFC1-215ENST00000512881 TJP2Q9UDY2 1190 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 DPP7Q9UHL4 492 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 ADAM28Q9UKQ2 775 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 TPX2Q9ULW0 747 aaKnown RBP7.55□□□□□ -1.2
RFC1-215ENST00000512881 SORCS3Q9UPU3 1222 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 DNM3Q9UQ16 869 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 TLR6Q9Y2C9 796 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 CAPN6Q9Y6Q1 641 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 PLXNA4Q9HCM2 1894 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 ZMYM2Q9UBW7 1377 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 KIAA1671Q9BY89 1806 aa7.55□□□□□ -1.2
RFC1-215ENST00000512881 CCDC195A0A1B0GUA6 201 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 PP2D1A8MPX8 630 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 E9PMD0 336 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 K7ERI5 159 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 LAD1O00515 517 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 PTGESO14684 152 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 RECQL4O94761 1208 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 GLUD1P00367 558 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 C1RP00736 705 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 EDN1P05305 212 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 THP07101 528 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 ASGR2P07307 311 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 CDC25AP30304 524 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 PRPHP41219 470 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 NHLH1Q02575 133 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 TUSC3Q13454 348 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 HSP90AA2PQ14568 343 aaPredicted RBP7.54□□□□□ -1.2
RFC1-215ENST00000512881 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 KRT79Q5XKE5 535 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 FUT10Q6P4F1 479 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 LILRA6Q6PI73 481 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 C15orf39Q6ZRI6 1047 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 OTOP3Q7RTS5 596 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 MRPL41Q8IXM3 137 aaKnown RBP7.54□□□□□ -1.2
RFC1-215ENST00000512881 GPR65Q8IYL9 337 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 HDAC7Q8WUI4 952 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 RIN2Q8WYP3 895 aaPredicted RBP7.54□□□□□ -1.2
RFC1-215ENST00000512881 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
RFC1-215ENST00000512881 DPH2Q9BQC3 489 aaPredicted RBP7.54□□□□□ -1.2
RFC1-215ENST00000512881 PAAF1Q9BRP4 392 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 ADPGKQ9BRR6 497 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms