RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, humanhuman

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOBTB3-213ENST00000512878 CDH8P55286 799 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 MCCD1P59942 119 aaPredicted RBP13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 RPL10AP62906 217 aaKnown RBP13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 TNNC1P63316 161 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 TRPC3Q13507 836 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 NCOA4Q13772 614 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 TAF12Q16514 161 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 CEP135Q66GS9 1140 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 TXNDC8Q6A555 127 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 TSSK4Q6SA08 328 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 VSTM1Q6UX27 236 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 ZNF852Q6ZMS4 543 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 C4orf50Q6ZRC1 276 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 SMYD4Q8IYR2 804 aaPredicted RBP13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 SPATA20Q8TB22 786 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 NKD2Q969F2 451 aaPredicted RBP13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 GCNAQ96QF7 691 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 SDCBP2Q9H190 292 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 SMYD3Q9H7B4 428 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 MAGEC2Q9UBF1 373 aaPredicted RBP13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 NXF1Q9UBU9 619 aaKnown RBP13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 ZMYM5Q9UJ78 669 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 MAGED2Q9UNF1 606 aaPredicted RBP13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 CCL26Q9Y258 94 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 PIAS3Q9Y6X2 628 aa13.67□□□□□ -0.22
RHOBTB3-213ENST00000512878 IKBKBO14920 756 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 CALUO43852 315 aaPredicted RBP13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 PHACTR2O75167 634 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 KIF20AO95235 890 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 PTPN1P18031 435 aaKnown RBP13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 CCNE1P24864 410 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 MLLT6P55198 1093 aaPredicted RBP13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 CYP27A1Q02318 531 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 TNK2Q07912 1038 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 BIRC3Q13489 604 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 MAPRE1Q15691 268 aaKnown RBP13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 ZNF699Q32M78 642 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 MDH1BQ5I0G3 518 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 TXNDC11Q6PKC3 985 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 SV2AQ7L0J3 742 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 SCN4BQ8IWT1 228 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 B3GALNT2Q8NCR0 500 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 OR6B3Q8NGW1 331 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 USP13Q92995 863 aaPredicted RBP13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 SPATA17Q96L03 361 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 SLC22A12Q96S37 553 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 NELL2Q99435 816 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 BCO2Q9BYV7 579 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 SNX25Q9H3E2 840 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 UXTQ9UBK9 157 aaPredicted RBP13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
RHOBTB3-213ENST00000512878 SOBPA7XYQ1 873 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 ASS1P00966 412 aaKnown RBP13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 RPS9P46781 194 aaKnown RBP13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 RAP1GAPP47736 663 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 USP46P62068 366 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 CSTF1Q05048 431 aaKnown RBP13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 FAM160A1Q05DH4 1040 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 PPP3CAQ08209 521 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 MTAPQ13126 283 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 ARHGAP29Q52LW3 1261 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 MON1AQ86VX9 555 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 ADSSL1Q8N142 457 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 CELF5Q8N6W0 485 aaKnown RBP13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 BPIFB1Q8TDL5 484 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 FAM3CQ92520 227 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 ERCC4Q92889 916 aaPredicted RBP13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 CCDC47Q96A33 483 aaKnown RBP13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 CHFRQ96EP1 664 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 CEP295NLQ96MC4 621 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 TTLL2Q9BWV7 592 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 RBM12Q9NTZ6 932 aaKnown RBP13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 GTSE1Q9NYZ3 720 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 SDK1Q7Z5N4 2213 aa13.65□□□□□ -0.22
RHOBTB3-213ENST00000512878 A8MXQ7 604 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 F8VP50 259 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 CLDN5O00501 218 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 MAN2B1O00754 1011 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 DPYSL4O14531 572 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 HLA-DRAP01903 254 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 GRIK1P39086 918 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 PRCPP42785 496 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 MAGEA9P43362 315 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 ASPAP45381 313 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 VAMP7P51809 220 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 ENPEPQ07075 957 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 ADAM9Q13443 819 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 GAS6Q14393 721 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 SGSM1Q2NKQ1 1148 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 EDRF1Q3B7T1 1238 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 COBLL1Q53SF7 1204 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 SPOPLQ6IQ16 392 aa13.64□□□□□ -0.23
RHOBTB3-213ENST00000512878 SCARA5Q6ZMJ2 495 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms