RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ZNF227Q86WZ6 799 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 ZNF557Q8N988 423 aaPredicted RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 HASPINQ8TF76 798 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CRTAC1Q9NQ79 661 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 NSMCE4AQ9NXX6 385 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 KLK14Q9P0G3 267 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 EIF3LQ9Y262 564 aaKnown RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 POLR3AO14802 1390 aaPredicted RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 ABCC12Q96J65 1359 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 MROH7Q68CQ1 1323 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 RTN3O95197 1032 aaPredicted RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 ERCC1P07992 297 aaPredicted RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 FNTAP49354 379 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 DCTN2Q13561 401 aaKnown RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 GRIK4Q16099 956 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CACHD1Q5VU97 1274 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 PLA2G4FQ68DD2 849 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 OR2W6PQ8NHA6 318 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 AGR3Q8TD06 166 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 KLHL20Q9Y2M5 609 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 DAGLAQ9Y4D2 1042 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 PCDHA11Q9Y5I1 949 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 KIAA0232Q92628 1395 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 JCADQ9P266 1359 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 POLRMTO00411 1230 aaKnown RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 RGL2O15211 777 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 DAB1O75553 588 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 SOAT2O75908 522 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 PIK3R1P27986 724 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 SERPINB10P48595 397 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CAPZA1P52907 286 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 EFEMP1Q12805 493 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 ORC2Q13416 577 aaPredicted RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 WDR72Q3MJ13 1102 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 BEND6Q5SZJ8 279 aaPredicted RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 BROXQ5VW32 411 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 SERPINA13PQ6UXR4 307 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CHST13Q8NET6 341 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 OR10G6Q8NH81 332 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 SH3RF3Q8TEJ3 882 aaPredicted RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 TMEM159Q96B96 161 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 SLC9A7Q96T83 725 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 PIGUQ9H490 435 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CERS4Q9HA82 394 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CBX8Q9HC52 389 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 MYOZ2Q9NPC6 264 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 ENTPD4Q9Y227 616 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 ZBTB5O15062 677 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 HBP1O60381 514 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 H2AFXP16104 143 aaPredicted RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 CHMLP26374 656 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 HSPA13P48723 471 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 NUDT2P50583 147 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CASP9P55211 416 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 RPP38P78345 283 aaKnown RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 SF3B3Q15393 1217 aaKnown RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 PGS1Q32NB8 556 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 BLOC1S5Q8TDH9 187 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 NACC2Q96BF6 587 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 HEMGNQ9BXL5 484 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 MTFR1LQ9H019 292 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CLPBQ9H078 707 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 LDAHQ9H6V9 325 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 ZNHIT2Q9UHR6 403 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 SLC12A4Q9UP95 1085 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 TRAV19A0A0A6YYK7 116 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CBX4O00257 560 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 SCN2BO60939 215 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CPSF4O95639 269 aaKnown RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 APODP05090 189 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 PAX3P23760 479 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 ATP5F1P24539 256 aaPredicted RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 TRPM8Q7Z2W7 1104 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 WDR36Q8NI36 951 aaKnown RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 SENP7Q9BQF6 1050 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 TSPAN3O60637 253 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 IL18RAPO95256 599 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 TNFRSF8P28908 595 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 TAP1Q03518 808 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 VAC14Q08AM6 782 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 STK4Q13043 487 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 PTGISQ16647 500 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 KRT24Q2M2I5 525 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 EFL1Q7Z2Z2 1120 aaKnown RBP9.25□□□□□ -0.93
VCAN-208ENST00000512590 PPP1R36Q96LQ0 422 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 RBBP8Q99708 897 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 TMEM260Q9NX78 707 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 CLTAP09496 248 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 SKIV2L2P42285 1042 aaKnown RBP9.25□□□□□ -0.93
VCAN-208ENST00000512590 GCLMP48507 274 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 RPIAP49247 311 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 RPS6KA3P51812 740 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 PER3P56645 1201 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 GUCY2DQ02846 1103 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 SHQ1Q6PI26 577 aaKnown RBP9.25□□□□□ -0.93
VCAN-208ENST00000512590 SLC30A9Q6PML9 568 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 ARHGEF19Q8IW93 802 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 PDCD10Q9BUL8 212 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 SLC32A1Q9H598 525 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms