RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 ATXN3P54252 364 aaPredicted RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 CRADDP78560 199 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 DCAF12L1Q5VU92 463 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 SPATA21Q7Z572 469 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 HACE1Q8IYU2 909 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 PPP4R1Q8TF05 950 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 NDRG1Q92597 394 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 LPIN3Q9BQK8 851 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 B3GNT5Q9BYG0 378 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 ZC3H7BQ9UGR2 993 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 PRG3Q9Y2Y8 225 aaPredicted RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 NAV1Q8NEY1 1877 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 USP12O75317 370 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 SULT1E1P49888 294 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 CORO7P57737 925 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 NFIL3Q16649 462 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 QPCTQ16769 361 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 LRIG3Q6UXM1 1119 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 C7orf43Q8WVR3 580 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 ZNF516Q92618 1163 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 FAM136AQ96C01 138 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 FAM111AQ96PZ2 611 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 DDX20Q9UHI6 824 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 USP18Q9UMW8 372 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 MYO7AQ13402 2215 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
PRDM16-207ENST00000512462 FNTAP49354 379 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 NCKAP1LP55160 1127 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 TFDP3Q5H9I0 405 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 BRSK2Q8IWQ3 736 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 SLC7A14Q8TBB6 771 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 BHMTQ93088 406 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 LRRC37BQ96QE4 947 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 CASTOR2A6NHX0 329 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 SPATA31C2B4DYI2 1134 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 APOL1O14791 398 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 CFLARO15519 480 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 FARP2O94887 1054 aaPredicted RBP12.48□□□□□ -0.41
PRDM16-207ENST00000512462 LCA5LO95447 670 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 SLC25A27O95847 323 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 CCDC130P13994 396 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 GPD1P21695 349 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 KDSRQ06136 332 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 NIPA1Q7RTP0 329 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 SLC9A9Q8IVB4 645 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 EXOC8Q8IYI6 725 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 ABI1Q8IZP0 508 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 DTX3LQ8TDB6 740 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 EDEM1Q92611 657 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 CDKL2Q92772 493 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 GMLQ99445 158 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 CDT1Q9H211 546 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 DMAC2Q9NW81 257 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 KCNK1O00180 336 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 DFFAO00273 331 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 NDC80O14777 642 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 ARIH2O95376 493 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 TTC4O95801 387 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 MIPP30301 263 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 ABCD1P33897 745 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 GNL1P36915 607 aaPredicted RBP12.48□□□□□ -0.41
PRDM16-207ENST00000512462 TAF5Q15542 800 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 PKN2Q16513 984 aaKnown RBP12.48□□□□□ -0.41
PRDM16-207ENST00000512462 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
PRDM16-207ENST00000512462 PPFIA2O75334 1257 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 USP2O75604 605 aaPredicted RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 KRT37O76014 449 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 LGALS2P05162 132 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 TARSP26639 723 aaKnown RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 EPHB1P54762 984 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 NOMO3P69849 1222 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 PTK7Q13308 1070 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 FASTKD3Q14CZ7 662 aaKnown RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 TXNRD3NBQ6F5E7 133 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 SLC39A4Q6P5W5 647 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 DENND5BQ6ZUT9 1274 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 TRMT10CQ7L0Y3 403 aaKnown RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 GPC2Q8N158 579 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 TTC13Q8NBP0 860 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 APPL2Q8NEU8 664 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 CCDC97Q96F63 343 aaPredicted RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 KLC4Q9NSK0 619 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 NINJ2Q9NZG7 142 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 IQANK1A0A1B0GTG1 560 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 SOWAHBA6NEL2 793 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 FAM47DPA6NHR8 397 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 GOLGA8TH3BQL2 631 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 AVILO75366 819 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 ESRRAP11474 423 aaPredicted RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 GSCP56915 257 aaPredicted RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 AGBL2Q5U5Z8 902 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 SPATS2Q86XZ4 545 aaKnown RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 KCTD17Q8N5Z5 321 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 PDCD6IPQ8WUM4 868 aaKnown RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 TMEM176AQ96HP8 235 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 CNTRLQ7Z7A1 2325 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms