RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 TPOP07202 933 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 HNRNPCL4P0DMR1 293 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 ADH5P11766 374 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 KRT2P35908 639 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 CPA2P48052 419 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 ACTR2P61160 394 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 MRPS9P82933 396 aaKnown RBP6.69□□□□□ -1.34
CHD1-208ENST00000512392 LACTBP83111 547 aaPredicted RBP6.69□□□□□ -1.34
CHD1-208ENST00000512392 SLC20A2Q08357 652 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 MPP3Q13368 585 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 TUSC3Q13454 348 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 CAMK2DQ13557 499 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 NKG7Q16617 165 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 AMOTQ4VCS5 1084 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 SLC30A9Q6PML9 568 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 MARK2Q7KZI7 788 aaKnown RBP6.69□□□□□ -1.34
CHD1-208ENST00000512392 C10orf53Q8N6V4 93 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 USHBP1Q8N6Y0 703 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 FAM71DQ8N9W8 422 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 USP38Q8NB14 1042 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 DENND6BQ8NEG7 585 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 TP53INP1Q96A56 240 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 AGAP2Q99490 1192 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 FAM129AQ9BZQ8 928 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 ADAM7Q9H2U9 754 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 PRDM8Q9NQV8 689 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 ZC3H7BQ9UGR2 993 aaKnown RBP6.69□□□□□ -1.34
CHD1-208ENST00000512392 HOOK1Q9UJC3 728 aaKnown RBP6.69□□□□□ -1.34
CHD1-208ENST00000512392 ANAPC5Q9UJX4 755 aa6.69□□□□□ -1.34
CHD1-208ENST00000512392 NOSIPQ9Y314 301 aaKnown RBP6.69□□□□□ -1.34
CHD1-208ENST00000512392 CCDC78A2IDD5 438 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 MTRF1O75570 445 aaKnown RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 ITGA2BP08514 1039 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 DRD2P14416 443 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 KRT15P19012 456 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 GNAT2P19087 354 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 GARSP41250 739 aaKnown RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 USP11P51784 963 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 RPS3AP61247 264 aaKnown RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD1-208ENST00000512392 RPA4Q13156 261 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 NMIQ13287 307 aaPredicted RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 DOC2BQ14184 412 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 GEN1Q17RS7 908 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 C2orf76Q3KRA6 126 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 KLHL24Q6TFL4 600 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 ANGPTL8Q6UXH0 198 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 ATF7IPQ6VMQ6 1270 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 CCDC117Q8IWD4 279 aaPredicted RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 TUSC5Q8IXB3 177 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 C2CD4AQ8NCU7 369 aaPredicted RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 GMCL1P1Q8NEA9 526 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 FIBINQ8TAL6 211 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 SPATA20Q8TB22 786 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 PDLIM5Q96HC4 596 aaKnown RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 SPXQ9BT56 116 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 STRA6Q9BX79 667 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 TWSG1Q9GZX9 223 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 PCIF1Q9H4Z3 704 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 IL21RQ9HBE5 538 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 AATFQ9NY61 560 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD1-208ENST00000512392 EXTL2Q9UBQ6 330 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 MORF4L1Q9UBU8 362 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 ZNF281Q9Y2X9 895 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 CCL27Q9Y4X3 112 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 HS3ST4Q9Y661 456 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 CCDC169A6NNP5 214 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 VWA5AO00534 786 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 HNRNPRO43390 633 aaKnown RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 GAS2O43903 313 aaKnown RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 AMY2AP04746 511 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 GLI1P08151 1106 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 HSPA1AP0DMV8 641 aaKnown RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 HSPA1BP0DMV9 641 aaKnown RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 AMY2BP19961 511 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 IDUAP35475 653 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 AMPD2Q01433 879 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 ID3Q02535 119 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 RING1Q06587 406 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 BAK1Q16611 211 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 WDR93Q6P2C0 686 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 RABEPKQ7Z6M1 372 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 METTL23Q86XA0 190 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 ARMC10Q8N2F6 343 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 WDTC1Q8N5D0 677 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 OR6J1Q8NGC5 347 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 UTP4Q969X6 686 aaKnown RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 APOPT1Q96IL0 206 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 SNX22Q96L94 193 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 MYRFLQ96LU7 910 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 NLRP4Q96MN2 994 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 KCNJ15Q99712 375 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 KLHL4Q9C0H6 718 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 GSX1Q9H4S2 264 aaPredicted RBP6.68□□□□□ -1.34
CHD1-208ENST00000512392 CD93Q9NPY3 652 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 ZBTB40Q9NUA8 1239 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 LMBRD1Q9NUN5 540 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 ZDHHC7Q9NXF8 308 aa6.68□□□□□ -1.34
CHD1-208ENST00000512392 TAB2Q9NYJ8 693 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms