RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 RBPJLQ9UBG7 517 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-210ENST00000512332 A0A1B0GUA9 196 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 LACTBL1A8MY62 500 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 GOLGA8SH3BPF8 625 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 GPR25O00155 361 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 TYROBPO43914 113 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 C22orf31O95567 290 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 TRUB2O95900 331 aaKnown RBP9.69□□□□□ -0.86
CPNE4-210ENST00000512332 IFNB1P01574 187 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 KRT19P08727 400 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 IQCF3P0C7M6 154 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 STAG3L1P0CL83 205 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 SLC8A1P32418 973 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 CTCFP49711 727 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-210ENST00000512332 ZNF143P52747 638 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-210ENST00000512332 GPX6P59796 221 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 INCA1Q0VD86 236 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 TTLL4Q14679 1199 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 PKN2Q16513 984 aaKnown RBP9.69□□□□□ -0.86
CPNE4-210ENST00000512332 PDK4Q16654 411 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 WLSQ5T9L3 541 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 WDR78Q5VTH9 848 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 CGB2Q6NT52 195 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 NT5DC4Q86YG4 428 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 LINC01465Q8N7H1 131 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 PYROXD1Q8WU10 500 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 RSAD2Q8WXG1 361 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 SDCBP2Q9H190 292 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 SYNCQ9H7C4 482 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 ZWILCHQ9H900 591 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 MLXIPLQ9NP71 852 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 ASNSD1Q9NWL6 643 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 RABGEF1Q9UJ41 708 aa9.69□□□□□ -0.86
CPNE4-210ENST00000512332 SPDYE5A6NIY4 337 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 MICAL2O94851 1124 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ERBB2P04626 1255 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 PGK2P07205 417 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 NFICP08651 508 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 TXNP10599 105 aaKnown RBP9.68□□□□□ -0.86
CPNE4-210ENST00000512332 KRT15P19012 456 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 MIPP30301 263 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 RPL22P35268 128 aaKnown RBP9.68□□□□□ -0.86
CPNE4-210ENST00000512332 CDH8P55286 799 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 OSTNP61366 133 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 NCALDP61601 193 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 AMHR2Q16671 573 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 TMEM132AQ24JP5 1023 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 KLHL38Q2WGJ6 581 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 FAM133BQ5BKY9 247 aaKnown RBP9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ADGRD1Q6QNK2 874 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 RPAINQ86UA6 219 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 FAM228AQ86W67 206 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 VSIG1Q86XK7 387 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 FITM2Q8N6M3 262 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 KCTD6Q8NC69 237 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 DCPSQ96C86 337 aaKnown RBP9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ACSF2Q96CM8 615 aaPredicted RBP9.68□□□□□ -0.86
CPNE4-210ENST00000512332 HAUS1Q96CS2 278 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 MMP19Q99542 508 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ELOVL4Q9GZR5 314 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ACSS3Q9H6R3 686 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 TXNRD2Q9NNW7 524 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 METTL5Q9NRN9 209 aaKnown RBP9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ADARB2Q9NS39 739 aaKnown RBP9.68□□□□□ -0.86
CPNE4-210ENST00000512332 AGAP1Q9UPQ3 857 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 C2CD2Q9Y426 696 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 CLUHO75153 1309 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ASB14A6NK59 587 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 POC1B-GALNT4F8VUJ3 575 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ZWINTO95229 277 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 GJB1P08034 283 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 CCNB1P14635 433 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 CLCN3P51790 818 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 YARSP54577 528 aaKnown RBP9.68□□□□□ -0.86
CPNE4-210ENST00000512332 GDF10P55107 478 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 LAMC2Q13753 1193 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 STILQ15468 1287 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 SMTNL2Q2TAL5 461 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 Q3C1V9 767 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 KCNT1Q5JUK3 1230 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 SPDYAQ5MJ70 313 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 JADE1Q6IE81 842 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ASRGL1Q7L266 308 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 TMEM192Q8IY95 271 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ANKRD13AQ8IZ07 590 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 PDIK1LQ8N165 341 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 SHCBP1Q8NEM2 672 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 AFG1LQ8WV93 481 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 TRAPPC12Q8WVT3 735 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ALKBH8Q96BT7 664 aaKnown RBP9.68□□□□□ -0.86
CPNE4-210ENST00000512332 TWNKQ96RR1 684 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 CNPY3Q9BT09 278 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 R3HDMLQ9H3Y0 253 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 RNPEPQ9H4A4 650 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 ARHGEF3Q9NR81 526 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 TJP2Q9UDY2 1190 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 BARX2Q9UMQ3 279 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms