RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TLL2Q9Y6L7 1015 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 CENPFP49454 3210 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 MYO5AQ9Y4I1 1855 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF646O15015 1829 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 SALL3Q9BXA9 1300 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 FRMD3A2A2Y4 597 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 NT5C1B-RDH14C9J2C7 533 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM227AF5H4B4 570 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 CTIFO43310 598 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 PRKAB2O43741 272 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 SUSD5O60279 629 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 RNGTTO60942 597 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 PTP4A3O75365 173 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 H2AFYO75367 372 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 ALDH1A2O94788 518 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 SOD2P04179 222 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 LAG3P18627 525 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 GSTT1P30711 240 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 OR1G1P47890 313 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 CLCQ05315 142 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 PTK2Q05397 1052 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 C19orf57Q0VDD7 668 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 TUBA3CQ13748 450 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 ARID5BQ14865 1188 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 ADIPOQQ15848 244 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 HADHQ16836 314 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 CFAP221Q4G0U5 840 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 CST9Q5W186 159 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 FDX2Q6P4F2 183 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 TXNDC11Q6PKC3 985 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 APOA5Q6Q788 366 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 HHIPL2Q6UWX4 724 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 LYPD8Q6UX82 237 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF574Q6ZN55 896 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 TXLNBQ8N3L3 684 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 LCORLQ8N3X6 602 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM71DQ8N9W8 422 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 KBTBD3Q8NAB2 608 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 KCNG4Q8TDN1 519 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 CHTF18Q8WVB6 975 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 AIDAQ96BJ3 306 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 LENG8Q96PV6 779 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 PSKH2Q96QS6 385 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 CNPPD1Q9BV87 410 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 AP5M1Q9H0R1 490 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 SERHL2Q9H4I8 314 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 PARVGQ9HBI0 331 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 DDX4Q9NQI0 724 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 ATPIF1Q9UII2 106 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 PALD1Q9ULE6 856 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 ASB3Q9Y575 518 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 PCDHGA1Q9Y5H4 931 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 AKAP11Q9UKA4 1901 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 PSME4Q14997 1843 aa5.31□□□□□ -1.56
TRAPPC11-208ENST00000511955 MAGEB6P1A0A0J9YX57 407 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 CAPN8A6NHC0 703 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 UBE2Q2LH0YL09 131 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ACKR2O00590 384 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 UBE2CO00762 179 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ADAMTS3O15072 1205 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 EXTL3O43909 919 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 BAG3O95817 575 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 LRG1P02750 347 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 DLATP10515 647 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 GSPT1P15170 499 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 JAK1P23458 1154 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 NF2P35240 595 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 RABIFP47224 123 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 LIG3P49916 1009 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 CARD18P57730 90 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 MYL6P60660 151 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 DR1Q01658 176 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 DOC2AQ14183 400 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 HABP2Q14520 560 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM110CQ1W6H9 321 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 CTXN3Q4LDR2 81 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 FYB2Q5VWT5 728 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 TAF2Q6P1X5 1199 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 CWC27Q6UX04 472 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 RSPH3Q86UC2 560 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 APOBEC3FQ8IUX4 373 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 EFHBQ8N7U6 833 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 C3orf58Q8NDZ4 430 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 TTC16Q8NEE8 873 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ETNPPLQ8TBG4 499 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 PIGOQ8TEQ8 1089 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 CDKL2Q92772 493 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM227BQ96M60 508 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 PRICKLE1Q96MT3 831 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 TXN2Q99757 166 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 GAL3ST1Q99999 423 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 SIKE1Q9BRV8 207 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 TAS2R3Q9NYW6 316 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 TRIM33Q9UPN9 1127 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ATP23Q9Y6H3 246 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ATP8B3O60423 1300 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 PDS5AQ29RF7 1337 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 RSPH10B2B2RC85 870 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms