RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 RINT1Q6NUQ1 792 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 SLC36A4Q6YBV0 504 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 TXNDC5Q8NBS9 432 aaKnown RBP12.48□□□□□ -0.41
RNF4-216ENST00000511859 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 TRMT2BQ96GJ1 504 aaKnown RBP12.48□□□□□ -0.41
RNF4-216ENST00000511859 CYP2S1Q96SQ9 504 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 RPF1Q9H9Y2 349 aaKnown RBP12.48□□□□□ -0.41
RNF4-216ENST00000511859 TRPC7Q9HCX4 862 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 KIAA1522Q9P206 1035 aaPredicted RBP12.48□□□□□ -0.41
RNF4-216ENST00000511859 LRWD1Q9UFC0 647 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 APOBEC2Q9Y235 224 aaKnown RBP12.48□□□□□ -0.41
RNF4-216ENST00000511859 RAXQ9Y2V3 346 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 A0A0A0MRY4 1105 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 ANO9A1A5B4 782 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 TK2O00142 265 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 CYB561D2O14569 222 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 SH3BP5O60239 455 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 DTNBO60941 627 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 PRPF40AO75400 957 aaKnown RBP12.47□□□□□ -0.41
RNF4-216ENST00000511859 MAPTP10636 758 aaKnown RBP12.47□□□□□ -0.41
RNF4-216ENST00000511859 HNRNPLP14866 589 aaKnown RBP eCLIP12.47□□□□□ -0.41
RNF4-216ENST00000511859 TNFSF9P41273 254 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 CDR1P51861 262 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 RPL10AP62906 217 aaKnown RBP12.47□□□□□ -0.41
RNF4-216ENST00000511859 MAPK7Q13164 816 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 NFE2Q16621 373 aaPredicted RBP12.47□□□□□ -0.41
RNF4-216ENST00000511859 C1orf186Q6ZWK4 172 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 PGBD3Q8N328 593 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 ALLCQ8N6M5 410 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 KIAA1958Q8N8K9 716 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 PNPLA1Q8N8W4 532 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 FSIP1Q8NA03 581 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 IL17RCQ8NAC3 791 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 TTC16Q8NEE8 873 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 MDM1Q8TC05 714 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 SH3RF2Q8TEC5 729 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 HAPLN2Q9GZV7 340 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 FSCN3Q9NQT6 498 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 TSC2P49815 1807 aa12.47□□□□□ -0.41
RNF4-216ENST00000511859 ATXN2Q99700 1313 aaKnown RBP12.47□□□□□ -0.41
RNF4-216ENST00000511859 E9PMD0 336 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 H0YCG3 227 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 SGK1O00141 431 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 NOL4O94818 638 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 PLS3P13797 630 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 HDCP19113 662 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 GUCY2CP25092 1073 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 EIF2DP41214 584 aaKnown RBP12.46□□□□□ -0.41
RNF4-216ENST00000511859 TNFRSF4P43489 277 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 PDE6CP51160 858 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 TSPY1Q01534 308 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 RPL6Q02878 288 aaKnown RBP12.46□□□□□ -0.41
RNF4-216ENST00000511859 ZNF33AQ06730 810 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 ZNF174Q15697 407 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 ENOX2Q16206 610 aaKnown RBP12.46□□□□□ -0.41
RNF4-216ENST00000511859 TOGARAM2Q6ZUX3 1019 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 GLRX5Q86SX6 157 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 ADGRG2Q8IZP9 1017 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 HMGB4Q8WW32 186 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 CAMK1GQ96NX5 476 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 SLC22A12Q96S37 553 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 PNKPQ96T60 521 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 RAB34Q9BZG1 259 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 ARHGAP26Q9UNA1 814 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 DERAQ9Y315 318 aa12.46□□□□□ -0.41
RNF4-216ENST00000511859 A0A1W2PQD8 194 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 ANTXRLA6NF34 631 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 OGTO15294 1046 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 TADA3O75528 432 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 GJB3O75712 270 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 KLF8O95600 359 aaPredicted RBP12.45□□□□□ -0.42
RNF4-216ENST00000511859 APODP05090 189 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 PFKLP17858 780 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 TIE1P35590 1138 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 TAF6P49848 677 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 SAFBQ15424 915 aaKnown RBP eCLIP12.45□□□□□ -0.42
RNF4-216ENST00000511859 WSCD1Q658N2 575 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 JADE1Q6IE81 842 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 SCUBE3Q8IX30 993 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 ARL14EPQ8N8R7 260 aaPredicted RBP12.45□□□□□ -0.42
RNF4-216ENST00000511859 SPATA18Q8TC71 538 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 KCNV2Q8TDN2 545 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 LRRC15Q8TF66 581 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 KCNN1Q92952 543 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 BICD1Q96G01 975 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 UBL7Q96S82 380 aaPredicted RBP12.45□□□□□ -0.42
RNF4-216ENST00000511859 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
RNF4-216ENST00000511859 PI4K2AQ9BTU6 479 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 RUSC1Q9BVN2 902 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 CCSER1Q9C0I3 900 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 FAM124BQ9H5Z6 455 aaPredicted RBP12.45□□□□□ -0.42
RNF4-216ENST00000511859 ABCB6Q9NP58 842 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 GCNT4Q9P109 453 aa12.45□□□□□ -0.42
RNF4-216ENST00000511859 HELZP42694 1942 aaKnown RBP12.45□□□□□ -0.42
RNF4-216ENST00000511859 A0A087WV48 116 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 FAM189A1O60320 539 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 SCP2P22307 547 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 CDC25AP30304 524 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 KIR2DL1P43626 348 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms